Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22e15
         (547 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81111-3|CAB03267.1|  334|Caenorhabditis elegans Hypothetical pr...    28   3.8  
AL022270-1|CAB63432.1| 1270|Caenorhabditis elegans Hypothetical ...    27   8.8  

>Z81111-3|CAB03267.1|  334|Caenorhabditis elegans Hypothetical
           protein T01G5.3 protein.
          Length = 334

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = +1

Query: 394 WTMPVV-LQAILWALWTLSVSMRTVRPLRPMSFIWFVPXLWA 516
           W +PV  L    W  WT +V++     L P+S  +F+P   A
Sbjct: 267 WYLPVFNLDIGNWIYWTSTVAISFFPVLDPLSLFYFLPVFGA 308


>AL022270-1|CAB63432.1| 1270|Caenorhabditis elegans Hypothetical
            protein C26G2.1 protein.
          Length = 1270

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +1

Query: 334  TVRTVFWTMRALHAEMFPVLWTMPVVLQAI 423
            T  T F+ +R+++A  F   WT PV+   +
Sbjct: 1035 TANTYFFQIRSINARGFASSWTSPVIFATL 1064


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,151,373
Number of Sequences: 27780
Number of extensions: 94880
Number of successful extensions: 251
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 247
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 251
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1102518352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)