Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte22e11
(264 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL023834-1|CAA19481.1| 177|Caenorhabditis elegans Hypothetical ... 27 1.4
AC024772-2|AAF60537.2| 756|Caenorhabditis elegans Osm-9 and cap... 27 1.4
AF038623-6|AAB94154.1| 388|Caenorhabditis elegans Hypothetical ... 27 2.4
Z81491-15|CAB04022.2| 216|Caenorhabditis elegans Hypothetical p... 26 4.2
U21321-6|AAG00046.1| 206|Caenorhabditis elegans Hypothetical pr... 25 5.6
AC025723-4|AAK29933.2| 1335|Caenorhabditis elegans Rab connectin... 25 5.6
Z78063-6|CAI91164.1| 189|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z78063-5|CAB01501.1| 228|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z78063-3|CAB01502.1| 236|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z68004-1|CAA91981.1| 435|Caenorhabditis elegans Hypothetical pr... 25 7.4
U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related... 25 7.4
AF038618-7|AAB92070.2| 227|Caenorhabditis elegans Syaptophysin ... 25 7.4
Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical pr... 25 9.8
Z54327-12|CAD56557.1| 543|Caenorhabditis elegans Hypothetical p... 25 9.8
Z54327-11|CAD56556.1| 589|Caenorhabditis elegans Hypothetical p... 25 9.8
Z54307-8|CAD56577.1| 543|Caenorhabditis elegans Hypothetical pr... 25 9.8
Z54307-7|CAD56576.1| 589|Caenorhabditis elegans Hypothetical pr... 25 9.8
Z54307-5|CAD56575.1| 513|Caenorhabditis elegans Hypothetical pr... 25 9.8
Z54307-4|CAD56574.1| 510|Caenorhabditis elegans Hypothetical pr... 25 9.8
Z54307-3|CAD56573.1| 516|Caenorhabditis elegans Hypothetical pr... 25 9.8
Z54307-2|CAD56572.1| 503|Caenorhabditis elegans Hypothetical pr... 25 9.8
Z54307-1|CAA91092.2| 493|Caenorhabditis elegans Hypothetical pr... 25 9.8
U50312-1|AAA92318.1| 285|Caenorhabditis elegans Hypothetical pr... 25 9.8
U41552-8|AAC69099.2| 771|Caenorhabditis elegans Hypothetical pr... 25 9.8
>AL023834-1|CAA19481.1| 177|Caenorhabditis elegans Hypothetical
protein Y32B12A.1 protein.
Length = 177
Score = 27.5 bits (58), Expect = 1.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 78 IRCAMCSSAYTGNKKKETFCTVYE 149
+RC C + TG++ K T CT Y+
Sbjct: 133 VRCDSCYTTITGHRFKCTICTDYD 156
>AC024772-2|AAF60537.2| 756|Caenorhabditis elegans Osm-9 and
capsaicin receptor-relatedprotein 4 protein.
Length = 756
Score = 27.5 bits (58), Expect = 1.4
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Frame = -3
Query: 238 LLSHHLQHMEHNGLFGKNTKVEVV*IILFCSYTVQNVSFFLL---PV*ADEHMAHLMVSG 68
LL H L+ + H+ K + +FC Y + S FLL P +H+A+ ++
Sbjct: 362 LLPHLLEQLVHHKWIAYGRKTLFAQLSMFCIYFICVTSCFLLRPSPFERQQHIANDLICF 421
Query: 67 Y---RRSYRSEPLPTVNY 23
Y R + + T+ Y
Sbjct: 422 YDFKTRRFNESAVSTIIY 439
>AF038623-6|AAB94154.1| 388|Caenorhabditis elegans Hypothetical
protein T08B6.2 protein.
Length = 388
Score = 26.6 bits (56), Expect = 2.4
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -1
Query: 258 FCYAADFYCHIICNTWNTTDF 196
F Y+ D +++ N WNT DF
Sbjct: 75 FAYSNDLDRNVVKNVWNTADF 95
>Z81491-15|CAB04022.2| 216|Caenorhabditis elegans Hypothetical
protein D1086.7 protein.
Length = 216
Score = 25.8 bits (54), Expect = 4.2
Identities = 13/44 (29%), Positives = 18/44 (40%)
Frame = -1
Query: 225 ICNTWNTTDFSGRTRRSKLCELFYFVHIPYKTFLFFYCPCRQTN 94
+CN WN + R +K + Y + KTF F P N
Sbjct: 62 LCNAWNECNDDERNCAAKGDKFIYSTNAVCKTFAPFPSPASSIN 105
>U21321-6|AAG00046.1| 206|Caenorhabditis elegans Hypothetical
protein ZK177.3 protein.
Length = 206
Score = 25.4 bits (53), Expect = 5.6
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +1
Query: 103 PTRAIKKKKRFVRYMNKIK*FTQLRPSCSSRKVRCVPC 216
PT+ K K + ++ NK K T + C + RC C
Sbjct: 5 PTKTFKCPKCWNKFENKPKLITHVDLECKHKYFRCELC 42
>AC025723-4|AAK29933.2| 1335|Caenorhabditis elegans Rab connectin
related protein 2 protein.
Length = 1335
Score = 25.4 bits (53), Expect = 5.6
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = +1
Query: 130 RFVRYMNKIK*FTQLRPSCSSRKVRCVPCVANDVTIKISSVTKKK 264
RF + +K F +CS + +C+ +A D TI + ++ K
Sbjct: 477 RFTVHGGPVKSFMLPPSNCSKQVTKCIASLAADNTIALLNIRDSK 521
>Z78063-6|CAI91164.1| 189|Caenorhabditis elegans Hypothetical
protein F45D3.4b protein.
Length = 189
Score = 25.0 bits (52), Expect = 7.4
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +3
Query: 189 FPKSPLCSMCCK*CDNKNQQRNKK 260
+P LCS+CC C N Q KK
Sbjct: 153 YPMGMLCSVCCD-CANSFVQEMKK 175
>Z78063-5|CAB01501.1| 228|Caenorhabditis elegans Hypothetical
protein F45D3.4a protein.
Length = 228
Score = 25.0 bits (52), Expect = 7.4
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +3
Query: 189 FPKSPLCSMCCK*CDNKNQQRNKK 260
+P LCS+CC C N Q KK
Sbjct: 192 YPMGMLCSVCCD-CANSFVQEMKK 214
>Z78063-3|CAB01502.1| 236|Caenorhabditis elegans Hypothetical
protein F45D3.3 protein.
Length = 236
Score = 25.0 bits (52), Expect = 7.4
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +3
Query: 189 FPKSPLCSMCCK*CDNKNQQRNKK 260
+P LCS+CC C N Q KK
Sbjct: 199 YPMGMLCSVCCD-CANSFVQEMKK 221
>Z68004-1|CAA91981.1| 435|Caenorhabditis elegans Hypothetical
protein F47B10.1 protein.
Length = 435
Score = 25.0 bits (52), Expect = 7.4
Identities = 10/38 (26%), Positives = 19/38 (50%)
Frame = -2
Query: 200 TFREEHEGRSCVNYFILFIYRTKRFFFFIARVGRRTHG 87
T + +H G+ C + T+R ++F + R T+G
Sbjct: 113 TKQTDHRGKKCEEVMVCKRLFTRREYYFSITLDRNTNG 150
>U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related.
see also lmb-protein 2 protein.
Length = 1535
Score = 25.0 bits (52), Expect = 7.4
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 81 RCAMCSSAYTGNKKKETFC 137
RC CS Y GN K T C
Sbjct: 799 RCDECSDGYFGNPKDGTEC 817
>AF038618-7|AAB92070.2| 227|Caenorhabditis elegans Syaptophysin
protein 1 protein.
Length = 227
Score = 25.0 bits (52), Expect = 7.4
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = -1
Query: 222 CNTWNTTDFSGRTRRSKLCELFYFVHIPYKTFLFFYC 112
C+ T +SG S FYFV++ ++ F C
Sbjct: 74 CDNQTRTFWSGDDSASGSAGFFYFVNVTALIYVIFIC 110
>Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical
protein F53B6.2a protein.
Length = 1045
Score = 24.6 bits (51), Expect = 9.8
Identities = 8/24 (33%), Positives = 12/24 (50%)
Frame = +3
Query: 111 GNKKKETFCTVYEQNKIIHTTSTF 182
G +K+E +C N +H TF
Sbjct: 254 GTRKREVYCVQTAHNVTVHVPDTF 277
>Z54327-12|CAD56557.1| 543|Caenorhabditis elegans Hypothetical
protein F14F11.1c protein.
Length = 543
Score = 24.6 bits (51), Expect = 9.8
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = -1
Query: 240 FYCHIICNTWNTTDFSGRTRRSKLCELFY-FVHIP 139
FY +ICN W T + RS C F+ FV P
Sbjct: 284 FYVDLICNIWFTIEL---LIRSLFCPSFHKFVRSP 315
>Z54327-11|CAD56556.1| 589|Caenorhabditis elegans Hypothetical
protein F14F11.1b protein.
Length = 589
Score = 24.6 bits (51), Expect = 9.8
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = -1
Query: 240 FYCHIICNTWNTTDFSGRTRRSKLCELFY-FVHIP 139
FY +ICN W T + RS C F+ FV P
Sbjct: 330 FYVDLICNIWFTIEL---LIRSLFCPSFHKFVRSP 361
>Z54307-8|CAD56577.1| 543|Caenorhabditis elegans Hypothetical
protein F14F11.1c protein.
Length = 543
Score = 24.6 bits (51), Expect = 9.8
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = -1
Query: 240 FYCHIICNTWNTTDFSGRTRRSKLCELFY-FVHIP 139
FY +ICN W T + RS C F+ FV P
Sbjct: 284 FYVDLICNIWFTIEL---LIRSLFCPSFHKFVRSP 315
>Z54307-7|CAD56576.1| 589|Caenorhabditis elegans Hypothetical
protein F14F11.1b protein.
Length = 589
Score = 24.6 bits (51), Expect = 9.8
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = -1
Query: 240 FYCHIICNTWNTTDFSGRTRRSKLCELFY-FVHIP 139
FY +ICN W T + RS C F+ FV P
Sbjct: 330 FYVDLICNIWFTIEL---LIRSLFCPSFHKFVRSP 361
>Z54307-5|CAD56575.1| 513|Caenorhabditis elegans Hypothetical
protein F14F11.1g protein.
Length = 513
Score = 24.6 bits (51), Expect = 9.8
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = -1
Query: 240 FYCHIICNTWNTTDFSGRTRRSKLCELFY-FVHIP 139
FY +ICN W T + RS C F+ FV P
Sbjct: 254 FYVDLICNIWFTIEL---LIRSLFCPSFHKFVRSP 285
>Z54307-4|CAD56574.1| 510|Caenorhabditis elegans Hypothetical
protein F14F11.1f protein.
Length = 510
Score = 24.6 bits (51), Expect = 9.8
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = -1
Query: 240 FYCHIICNTWNTTDFSGRTRRSKLCELFY-FVHIP 139
FY +ICN W T + RS C F+ FV P
Sbjct: 251 FYVDLICNIWFTIEL---LIRSLFCPSFHKFVRSP 282
>Z54307-3|CAD56573.1| 516|Caenorhabditis elegans Hypothetical
protein F14F11.1e protein.
Length = 516
Score = 24.6 bits (51), Expect = 9.8
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = -1
Query: 240 FYCHIICNTWNTTDFSGRTRRSKLCELFY-FVHIP 139
FY +ICN W T + RS C F+ FV P
Sbjct: 257 FYVDLICNIWFTIEL---LIRSLFCPSFHKFVRSP 288
>Z54307-2|CAD56572.1| 503|Caenorhabditis elegans Hypothetical
protein F14F11.1d protein.
Length = 503
Score = 24.6 bits (51), Expect = 9.8
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = -1
Query: 240 FYCHIICNTWNTTDFSGRTRRSKLCELFY-FVHIP 139
FY +ICN W T + RS C F+ FV P
Sbjct: 244 FYVDLICNIWFTIEL---LIRSLFCPSFHKFVRSP 275
>Z54307-1|CAA91092.2| 493|Caenorhabditis elegans Hypothetical
protein F14F11.1a protein.
Length = 493
Score = 24.6 bits (51), Expect = 9.8
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = -1
Query: 240 FYCHIICNTWNTTDFSGRTRRSKLCELFY-FVHIP 139
FY +ICN W T + RS C F+ FV P
Sbjct: 234 FYVDLICNIWFTIEL---LIRSLFCPSFHKFVRSP 265
>U50312-1|AAA92318.1| 285|Caenorhabditis elegans Hypothetical
protein B0222.1 protein.
Length = 285
Score = 24.6 bits (51), Expect = 9.8
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 96 SSAYTGNKKKETFCTVYEQNKIIHTTSTFVFFPKSPL 206
SS +GN + + + + QN + HTTST F SPL
Sbjct: 66 SSYRSGNTQ---YSSNFRQN-VFHTTSTTTMFSYSPL 98
>U41552-8|AAC69099.2| 771|Caenorhabditis elegans Hypothetical
protein K07E3.2 protein.
Length = 771
Score = 24.6 bits (51), Expect = 9.8
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +3
Query: 72 LTIRCAMCSSAYTGNKKKETFCTVYEQNKIIHTTS 176
LT A C + NK K F Y QN + TS
Sbjct: 230 LTNCFATCMNLRMKNKSKTQFAIEYSQNMFLERTS 264
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,638,120
Number of Sequences: 27780
Number of extensions: 138421
Number of successful extensions: 363
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 362
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 363
length of database: 12,740,198
effective HSP length: 66
effective length of database: 10,906,718
effective search space used: 229041078
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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