Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22e10
         (725 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    24   1.7  
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    23   3.9  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   3.9  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   5.1  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    22   5.1  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   5.1  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   6.8  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   6.8  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     21   9.0  

>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 13/43 (30%), Positives = 17/43 (39%)
 Frame = +1

Query: 280 HANPSAIQAYEMTPEGGVGLGGACADSAGALITPHPPLHHPVP 408
           HA P    ++  TP        A +    A+   H P HHP P
Sbjct: 427 HATPHHHHSHAATPHHQHSTPLAHSSYPAAIQIGHTPHHHPHP 469


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -2

Query: 712 FIFITSPFFDLAMIFVSCREC 650
           FI    PFF + ++   CR C
Sbjct: 18  FILCWLPFFTMYLVRAFCRNC 38


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -2

Query: 712 FIFITSPFFDLAMIFVSCREC 650
           FI    PFF + ++   CR C
Sbjct: 466 FILCWLPFFTMYLVRAFCRNC 486


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 400 PVPQTSQQLHHDPRKTKPNH 459
           P+PQ   ++HHD      NH
Sbjct: 505 PLPQHLPRIHHDAEWKVGNH 524


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 400 PVPQTSQQLHHDPRKTKPNH 459
           P+PQ   ++HHD      NH
Sbjct: 420 PLPQHLPRIHHDAEWKVGNH 439


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 400 PVPQTSQQLHHDPRKTKPNH 459
           P+PQ   ++HHD      NH
Sbjct: 739 PLPQHLPRIHHDAEWKVGNH 758


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 410 RPHSNSIMIRGKQNPITT 463
           RP SNSI  +  ++P TT
Sbjct: 553 RPGSNSIERQSSESPFTT 570


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 410 RPHSNSIMIRGKQNPITT 463
           RP SNSI  +  ++P TT
Sbjct: 553 RPGSNSIERQSSESPFTT 570


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 217 NFTNLPLFRNSQYSLTLAL 161
           N TN+    N+QY+L L+L
Sbjct: 505 NVTNILSMDNTQYNLDLSL 523


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,357
Number of Sequences: 438
Number of extensions: 4173
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22535775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)