Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22e08
         (709 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7R618 Cluster: GLP_81_28195_30384; n=1; Giardia lambli...    37   0.42 
UniRef50_A6GGP8 Cluster: Hypothetical serine/threonine protein p...    33   9.1  
UniRef50_A0DGJ0 Cluster: Chromosome undetermined scaffold_5, who...    33   9.1  

>UniRef50_Q7R618 Cluster: GLP_81_28195_30384; n=1; Giardia lamblia
           ATCC 50803|Rep: GLP_81_28195_30384 - Giardia lamblia
           ATCC 50803
          Length = 729

 Score = 37.1 bits (82), Expect = 0.42
 Identities = 26/67 (38%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
 Frame = +1

Query: 136 ENIRAFYETTSKLHCNLVSLTEQIIEFNIGKQILHRRSDFSAL-SSFEDLYS--TIRLYP 306
           EN    YE  S LH  +  L + II+     QI  + +D  AL  S ED  S  T+   P
Sbjct: 406 ENNTYLYEKNSALHSEIGELKQNIIKLKA--QIEQQNADNEALRKSLEDARSAPTLSALP 463

Query: 307 KHTCGHP 327
            HT GHP
Sbjct: 464 GHTSGHP 470


>UniRef50_A6GGP8 Cluster: Hypothetical serine/threonine protein
           phosphatase; n=1; Plesiocystis pacifica SIR-1|Rep:
           Hypothetical serine/threonine protein phosphatase -
           Plesiocystis pacifica SIR-1
          Length = 561

 Score = 32.7 bits (71), Expect = 9.1
 Identities = 21/54 (38%), Positives = 29/54 (53%)
 Frame = +1

Query: 112 SARFPFAAENIRAFYETTSKLHCNLVSLTEQIIEFNIGKQILHRRSDFSALSSF 273
           SARFPF  +  RAF    SKL CNL+    +  + N G + ++R  D   L+ F
Sbjct: 448 SARFPFGRKQFRAF---MSKLGCNLLVRGHE--KVNAGFKKVYRDDDIQLLTVF 496


>UniRef50_A0DGJ0 Cluster: Chromosome undetermined scaffold_5, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_5,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 235

 Score = 32.7 bits (71), Expect = 9.1
 Identities = 17/44 (38%), Positives = 30/44 (68%)
 Frame = +1

Query: 133 AENIRAFYETTSKLHCNLVSLTEQIIEFNIGKQILHRRSDFSAL 264
           ++N+  F  T S + CNL SL  + ++F+ GKQ+ H R+D+++L
Sbjct: 73  SKNMHNFKATVSFIQCNLSSL--EGLKFD-GKQVKHLRADYNSL 113


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 655,228,717
Number of Sequences: 1657284
Number of extensions: 12393397
Number of successful extensions: 28385
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 27554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28381
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56611575523
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)