Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22e08
         (709 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.4  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      21   7.4  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   7.4  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    21   7.4  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    21   7.4  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = +1

Query: 157 ETTSKLHCNLVSLTEQIIEFNIGKQILHRRSDFSALSSFEDLYSTI 294
           E   K+  N   + ++I  F++  QIL+ R+ FSA   F   YS +
Sbjct: 665 ELIHKIETNDHEIIDKIEMFSL--QILNERAGFSAAGFFPIDYSLV 708


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 6/22 (27%), Positives = 15/22 (68%)
 Frame = +1

Query: 151 FYETTSKLHCNLVSLTEQIIEF 216
           +YE+ + +HC++ S + Q  ++
Sbjct: 86  YYESRAHIHCSVKSESSQAAKY 107


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +3

Query: 579 PISLSECC*CSKQTFFFINCLVSI*TNYCTK 671
           P S S C   +  +   +NCL +  TN+  K
Sbjct: 233 PASRSSCLGSNTSSMLSLNCLNTGRTNFTNK 263


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +3

Query: 579 PISLSECC*CSKQTFFFINCLVSI*TNYCTK 671
           P S S C   +  +   +NCL +  TN+  K
Sbjct: 22  PASRSSCLGSNTSSMLSLNCLNTGRTNFTNK 52


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +3

Query: 579 PISLSECC*CSKQTFFFINCLVSI*TNYCTK 671
           P S S C   +  +   +NCL +  TN+  K
Sbjct: 22  PASRSSCLGSNTSSMLSLNCLNTGRTNFTNK 52


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,415
Number of Sequences: 336
Number of extensions: 3604
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)