Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22e08
         (709 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF024502-8|AAY43996.1|  297|Caenorhabditis elegans Hypothetical ...    29   2.5  
Z81127-3|CAB03388.2|  310|Caenorhabditis elegans Hypothetical pr...    28   7.5  
AF125451-2|AAP82633.1|  167|Caenorhabditis elegans Hypothetical ...    28   7.5  
AC024805-10|AAK39342.3| 1058|Caenorhabditis elegans Hypothetical...    28   7.5  
AL031634-2|CAA21035.1|  351|Caenorhabditis elegans Hypothetical ...    27   9.9  

>AF024502-8|AAY43996.1|  297|Caenorhabditis elegans Hypothetical
           protein M151.8 protein.
          Length = 297

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +3

Query: 30  EFKIK**NALCATTSYCIVTGTFFNI 107
           EFK++  +   AT +YC  +GTFF+I
Sbjct: 269 EFKVEKHDGTKATVAYCATSGTFFSI 294


>Z81127-3|CAB03388.2|  310|Caenorhabditis elegans Hypothetical
           protein T22G5.3 protein.
          Length = 310

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = -2

Query: 624 KMSVLSINNILIKKLALNITSSLNHCSMLLVPMTALLYNLLARYFAI 484
           K +VL  N + +  LAL+   S NH  M   P+  +  N+   Y  I
Sbjct: 15  KDTVLKTNEMALLNLALSSDKSRNHVKMFKKPINFIWLNIYEDYCLI 61


>AF125451-2|AAP82633.1|  167|Caenorhabditis elegans Hypothetical
           protein Y37E11B.1b protein.
          Length = 167

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -2

Query: 432 EAEERLICATCVLRLRDASLFRRQVLL 352
           EAE +L C+TC  R  +A L R+  ++
Sbjct: 36  EAERKLECSTCQKRFHNAELLRKHQIV 62


>AC024805-10|AAK39342.3| 1058|Caenorhabditis elegans Hypothetical
           protein Y51H7C.11 protein.
          Length = 1058

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +1

Query: 148 AFYETTSKLHCNLVSLTEQIIEFNI 222
           A Y+  ++LH N+  L E ++EF I
Sbjct: 370 AHYDHVARLHINISQLAEHLVEFGI 394


>AL031634-2|CAA21035.1|  351|Caenorhabditis elegans Hypothetical
           protein Y32B12C.2 protein.
          Length = 351

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +1

Query: 577 GQFLYQNVVNAQNRHFFLLIV*YLFKLI 660
           G+F +    + QN+ F LLI   LFKLI
Sbjct: 197 GRFYFSTTTSLQNQGFVLLIQGILFKLI 224


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,872,961
Number of Sequences: 27780
Number of extensions: 323501
Number of successful extensions: 779
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 779
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)