Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22e07
         (769 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   2.7  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   4.7  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   6.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   8.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   8.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   8.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   8.2  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   8.2  

>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +1

Query: 319 TY*NWPVTCERISETAYFYCGSLSSQFTRLCNMGI 423
           T+ +W V    ++   Y +C SLS  F +   +GI
Sbjct: 56  TFKSWKVLYTSLTSFGYLFCASLS--FYKAFKIGI 88


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -1

Query: 172 SSRKHYLLYFNSNITLFISDKYI 104
           S++ +YL+  N N T  + +KY+
Sbjct: 14  STQPNYLILSNKNNTYLVLNKYL 36


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -2

Query: 363 GFTNPFACN 337
           GF NPF CN
Sbjct: 494 GFHNPFTCN 502


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +1

Query: 643 LFQSFRRCSMSSDGSFTFSHY 705
           LF+S R C   S     FSH+
Sbjct: 147 LFRSSRMCFFKSSKKPAFSHF 167


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +1

Query: 643 LFQSFRRCSMSSDGSFTFSHY 705
           LF+S R C   S     FSH+
Sbjct: 147 LFRSSRMCFFKSSKKPAFSHF 167


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +1

Query: 643 LFQSFRRCSMSSDGSFTFSHY 705
           LF+S R C   S     FSH+
Sbjct: 147 LFRSSRMCFFKSSKKPAFSHF 167


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +1

Query: 643 LFQSFRRCSMSSDGSFTFSHY 705
           LF+S R C   S     FSH+
Sbjct: 147 LFRSSRMCFFKSSKKPAFSHF 167


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = +2

Query: 485 QQKKSKSEPGPLKKWWNSLRDNEKVFYPIL 574
           QQ    S PGP    W++++    V  P +
Sbjct: 292 QQATPYSAPGPTYSTWSTVQTPTTVMSPTI 321


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,162
Number of Sequences: 336
Number of extensions: 4179
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20650031
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)