Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte22e05
(683 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0939 + 32914936-32915055,32916674-32916823,32917160-329173... 32 0.49
05_06_0052 + 25199253-25199304,25199676-25199949,25200709-25201069 31 0.85
02_02_0671 - 12811102-12811608 30 2.0
12_02_0106 + 13654686-13655789 29 2.6
01_05_0250 - 19907517-19908429,19910000-19910268 29 2.6
10_06_0002 + 9382559-9382937,9383008-9383180,9386752-9386901,938... 29 3.4
04_04_0795 - 28111155-28111649,28111747-28112405,28112499-281126... 29 3.4
11_06_0522 + 24568070-24568571,24568710-24569825,24569968-24570122 29 4.5
05_07_0359 - 29539294-29540832,29542366-29542518 29 4.5
07_03_1169 + 24501594-24502826 28 6.0
11_06_0524 + 24576782-24577268,24577402-24578517,24578658-24578797 28 7.9
03_04_0184 - 18210875-18212065 28 7.9
02_01_0390 - 2824585-2825307,2828206-2828460,2829006-2829107,282... 28 7.9
>02_05_0939 + 32914936-32915055,32916674-32916823,32917160-32917305,
32917396-32917552,32917695-32917753,32918180-32918291,
32918901-32919050,32919180-32919316,32919977-32920123,
32920197-32920298,32920674-32920731,32920840-32920941,
32921905-32921942,32922031-32922157,32922228-32922401,
32922542-32922628,32923838-32923947,32924654-32924714,
32925338-32925515,32925628-32925833,32926108-32926227,
32927202-32927423,32927708-32927847,32927976-32928087,
32928254-32928304,32928384-32928473,32928630-32928800,
32928897-32929049,32929860-32930036,32930131-32930268,
32930363-32930433,32930837-32930936,32931156-32931212,
32931301-32931357,32931451-32931531,32931614-32931696,
32931831-32931966
Length = 1459
Score = 31.9 bits (69), Expect = 0.49
Identities = 18/81 (22%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Frame = -2
Query: 511 DDHIQAPKAANINPRSNITPPAISVPSPLSDPVGVVSGVFE--YCTMPAMSSAKPITQKV 338
++H+ KA N++P +N++ + P + P+G+ +G + Y T PA + Q +
Sbjct: 979 ENHVLRQKALNMSPLNNMSMATKAFPQKFATPIGLPNGEQKHGYETPPAAKYLASLPQSL 1038
Query: 337 LPNKHN--PMRKQTARFRLLV 281
++ P+ +Q +L+
Sbjct: 1039 TGSRRTRMPVERQEENHEILL 1059
>05_06_0052 + 25199253-25199304,25199676-25199949,25200709-25201069
Length = 228
Score = 31.1 bits (67), Expect = 0.85
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -1
Query: 419 SCWRCVWCVRILYDASYEQCQTNNAKSAAQ*TQSYAQTNGPVQTTC 282
+CWR C +I+ + Q T A + T SY Q N P+ TC
Sbjct: 40 ACWRGADCTQIMQSGACYQPSTIVAHCSYA-TNSYFQKNSPIGATC 84
>02_02_0671 - 12811102-12811608
Length = 168
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -2
Query: 436 PSPLSDPVGVVSGVFEYCTMPAMSSAKPITQKVLPNKHNP 317
PSP P G + CT+ A + KP T LP ++P
Sbjct: 96 PSPPLLPFGASHSFAKVCTIEAKARNKPATHSPLPKPYSP 135
>12_02_0106 + 13654686-13655789
Length = 367
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -2
Query: 493 PKAANINPRSNITPPAISVPSPLSDPVG 410
P AA + P S +PPA S +PL DP+G
Sbjct: 28 PPAAALPPHSAPSPPA-SAEAPLGDPIG 54
>01_05_0250 - 19907517-19908429,19910000-19910268
Length = 393
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +3
Query: 153 KQIQLKSVTMPTSAVYQPTTVTYEQQPNDQRWNCPISYFSRRVTSS 290
+ IQ K MP+S + T+ + PND N P++ S +++ S
Sbjct: 311 RSIQNKKAEMPSSVTGKAPTMPTKSAPNDSMKNKPVAIGSAQMSGS 356
>10_06_0002 + 9382559-9382937,9383008-9383180,9386752-9386901,
9387180-9387325,9387416-9387572,9387720-9387778,
9388204-9388360,9389001-9389150,9389280-9389416,
9390071-9390217,9390292-9390393,9390742-9390799,
9391997-9392034,9392124-9392250,9392320-9392493,
9393125-9393256,9393940-9394049,9394752-9394812,
9395036-9395213,9395326-9395531,9395796-9395915,
9396496-9396594,9396983-9397204,9397482-9397621,
9397741-9397852,9398021-9398071,9398151-9398240,
9398397-9398567,9398663-9398815,9399774-9399950,
9400045-9400182,9400295-9400365,9400739-9400838,
9401324-9401380,9401469-9401525,9401619-9401699,
9401782-9401864,9401975-9402110
Length = 1632
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/81 (20%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Frame = -2
Query: 511 DDHIQAPKAANINPRSNITPPAISVPSPLSDPVGVVSGVFE--YCTMPAMSSAKPITQKV 338
++H+ KA N++P +N+ + P + P+G+ +G + Y T P + Q +
Sbjct: 1152 ENHVLRQKALNMSPLNNMPMTTKAFPQKFATPIGLPNGEQKHGYETPPPAKYLASLPQSL 1211
Query: 337 LPNKHN--PMRKQTARFRLLV 281
++ P+ +Q +L+
Sbjct: 1212 TRSRRTRMPVERQEENHEILL 1232
>04_04_0795 -
28111155-28111649,28111747-28112405,28112499-28112635,
28112747-28113093
Length = 545
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = -2
Query: 436 PSPLSDPVGVVSGVFEYCTMPAMSSAKPITQKVLPNKHNPMRKQTA 299
P+P PV + PA S A P+ PN +P+RK A
Sbjct: 10 PTPTPPPVSTPPSQIQSPAAPASSRASPLRGMGTPNIASPVRKAVA 55
>11_06_0522 + 24568070-24568571,24568710-24569825,24569968-24570122
Length = 590
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = -2
Query: 418 PVGVVSGVFEYCTMPAMSSAKPITQKVLPNKHNPM 314
PV G+ Y A ++ P+ ++PN+HN M
Sbjct: 302 PVFTSRGLVRYAGTTANNNGLPVPMPIMPNQHNTM 336
>05_07_0359 - 29539294-29540832,29542366-29542518
Length = 563
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -2
Query: 472 PRSNITPPAISVPSPLSDPVGVVSG 398
PR N TPP +SVP + +GV G
Sbjct: 309 PRKNATPPVLSVPPTAAAVLGVKRG 333
>07_03_1169 + 24501594-24502826
Length = 410
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -3
Query: 591 PGGPWTGLGQSAQPHHCWAPP 529
PGGPW S +P W+PP
Sbjct: 59 PGGPWKVYALSRRPPPPWSPP 79
>11_06_0524 + 24576782-24577268,24577402-24578517,24578658-24578797
Length = 580
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = -2
Query: 418 PVGVVSGVFEYCTMPAMSSAKPITQKVLPNKHNPM 314
P + G+ Y + A ++ P+ ++PN+HN M
Sbjct: 297 PKYISRGLVRYTGVDANNNGLPVPMPIMPNQHNTM 331
>03_04_0184 - 18210875-18212065
Length = 396
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -3
Query: 591 PGGPWTGLGQSAQPHHCWAPP 529
PGGPW S +P W+PP
Sbjct: 54 PGGPWKVYAVSRRPLPPWSPP 74
>02_01_0390 -
2824585-2825307,2828206-2828460,2829006-2829107,
2829386-2829598,2829688-2829897
Length = 500
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -3
Query: 612 RAHTEPPPGGPWTGLGQSAQPHHCWAPP 529
+AHT P WT +G H+CW P
Sbjct: 130 KAHTHP--NVLWTQVGDGDSDHYCWQRP 155
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,156,852
Number of Sequences: 37544
Number of extensions: 397561
Number of successful extensions: 1324
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1323
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1733104716
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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