Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22e05
         (683 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    25   1.7  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    25   2.2  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          25   2.9  
CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.          25   2.9  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   6.8  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           23   9.0  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   9.0  
AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein p...    23   9.0  

>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -1

Query: 407 CVWCVRILYDASYEQCQTNN 348
           C WC   LYD    +C T +
Sbjct: 49  CAWCTDELYDMRKSRCMTKH 68


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 14/31 (45%), Positives = 15/31 (48%)
 Frame = +3

Query: 510 SRLTGGKEAPSSGAAGLTALNPSTDPLVAAQ 602
           SR TG K   S     L  LN STD  + AQ
Sbjct: 586 SRYTGEKSTRSDALRTLNLLNRSTDHALLAQ 616


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = -2

Query: 457 TPPAISVPSPLSDPVGVVSGVFEYCTMP 374
           TP   + P P+  P G +    E C +P
Sbjct: 28  TPATAAAPQPVQRPYGKIVLTLENCLLP 55


>CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.
          Length = 295

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = -2

Query: 457 TPPAISVPSPLSDPVGVVSGVFEYCTMP 374
           TP   + P P+  P G +    E C +P
Sbjct: 28  TPATAAAPQPVQRPYGKIVLTLENCLLP 55


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 487  AANINPRSNITPPAISV 437
            AA++NP  N  PPA+ +
Sbjct: 1248 AASVNPHGNDCPPALKL 1264


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 10/38 (26%), Positives = 16/38 (42%)
 Frame = -3

Query: 606 HTEPPPGGPWTGLGQSAQPHHCWAPPCRLSAATTISKH 493
           H      G +  +    Q HH WA    L+A+   S++
Sbjct: 182 HPSMVASGAYGTMSMHPQTHHSWAACMELAASADPSRN 219


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +3

Query: 519 TGGKEAPSSGAAGLTALNP 575
           TG   +PS+ AAGLT  +P
Sbjct: 672 TGRDISPSASAAGLTTRSP 690


>AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein
           protein.
          Length = 298

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = -3

Query: 396 CSNTVRCQL*AVPNQ*RKKCCPINTILC 313
           C+N V+C L   P++     C + ++ C
Sbjct: 271 CTNDVKCLLCGGPHRIAAASCAVTSMTC 298


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 689,845
Number of Sequences: 2352
Number of extensions: 14285
Number of successful extensions: 29
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)