Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22e05
         (683 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              24   1.6  
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    24   1.6  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    24   1.6  
AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor prot...    22   4.7  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   6.3  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    22   6.3  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    21   8.3  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    21   8.3  

>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -3

Query: 423 LILLALCLVCSNTVRC 376
           L LL  CL+CS +V C
Sbjct: 7   LSLLITCLICSPSVHC 22


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 8/23 (34%), Positives = 10/23 (43%)
 Frame = -3

Query: 597 PPPGGPWTGLGQSAQPHHCWAPP 529
           P P GPW  + +      C  PP
Sbjct: 132 PRPMGPWISVQEQVPRFRCIGPP 154


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +2

Query: 329 IGQHFLRYWFGTAHSWHRTVFEHTRH 406
           I Q FL +W  T H W R    + +H
Sbjct: 168 IVQPFLIHWIWTPHGWMRRNVLNKQH 193


>AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor
           protein.
          Length = 72

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 3/38 (7%)
 Frame = +3

Query: 249 NCPISYFSRRVTSSLNRAVCLRIGL---CLLGSTFCVI 353
           NC I  + RR         CL +G+   C++    C +
Sbjct: 25  NCEIDMYMRRKCQECRLKKCLTVGMRPECMVPEYQCAV 62


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
            protein.
          Length = 1308

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 195  VYQPTTVTYEQQPNDQR 245
            V  PTT+T  Q P +Q+
Sbjct: 1276 VIAPTTITSSQSPGNQQ 1292


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 3/38 (7%)
 Frame = +3

Query: 249 NCPISYFSRRVTSSLNRAVCLRIGL---CLLGSTFCVI 353
           NC I  + RR         CL +G+   C++    C +
Sbjct: 228 NCEIDMYMRRKCQECRLKKCLTVGMRPECVVPEYQCAV 265


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 415 VGVVSGVFEYCTMP 374
           VGV+ GVF  C +P
Sbjct: 274 VGVIMGVFLICWVP 287


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -1

Query: 674 AFFIVHEVAHLIVRSGRGVSDGRILSRHQ 588
           A  + H + H  +   R +S  RIL +H+
Sbjct: 425 ADLVEHRIRHSQIGISRAMSALRILEKHE 453


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,504
Number of Sequences: 438
Number of extensions: 3562
Number of successful extensions: 17
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20830365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)