Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte22d23
(632 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 153 2e-38
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 140 1e-34
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 126 2e-30
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 126 3e-30
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 120 2e-28
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 118 7e-28
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 117 1e-27
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 108 6e-25
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 91 2e-19
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 86 3e-18
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 85 8e-18
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 84 1e-17
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 77 2e-15
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 73 3e-14
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 73 3e-14
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 73 3e-14
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 69 7e-13
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 68 1e-12
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 46 3e-06
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 46 3e-06
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 43 4e-05
SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces ... 41 2e-04
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 30 0.24
SPAC23H4.15 |||ribosome biogenesis protein Tsr1 |Schizosaccharom... 30 0.32
SPBC12C2.08 |dnm1||dynamin Dnm1|Schizosaccharomyces pombe|chr 2|... 28 1.3
SPAC57A7.05 |||conserved protein |Schizosaccharomyces pombe|chr ... 27 1.7
SPAC1834.05 |alg9||mannosyltransferase complex subunit Alg9 |Sch... 27 2.3
SPBC1718.06 |msp1|mgm1|mitochondrial GTPase Msp1|Schizosaccharom... 27 3.0
SPAC328.04 |||AAA family ATPase, unknown biological role|Schizos... 27 3.0
SPBC16D10.04c |dna2||DNA replication endonuclease-helicase Dna2|... 26 3.9
SPCC594.05c |||COMPASS complex subunit |Schizosaccharomyces pomb... 26 3.9
SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyc... 26 5.2
SPAC222.14c |||GTP binding protein Sey1 |Schizosaccharomyces pom... 26 5.2
SPBC17D11.02c |||synoviolin homolog|Schizosaccharomyces pombe|ch... 25 6.9
SPAC26F1.13c |||leucine-tRNA ligase |Schizosaccharomyces pombe|c... 25 6.9
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 25 9.1
SPAC10F6.14c |||ABC1 kinase family protein|Schizosaccharomyces p... 25 9.1
SPCC417.08 |tef3||translation elongation factor eEF3|Schizosacch... 25 9.1
SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces po... 25 9.1
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 153 bits (372), Expect = 2e-38
Identities = 74/158 (46%), Positives = 104/158 (65%), Gaps = 2/158 (1%)
Frame = +3
Query: 93 IEAKIVVLGSQGVGKTSLVVRYIGKMFSKHVSPTIGASFFTCNISV-ENARVKLQVWDTA 269
I K+V+LG VGK+SLV+R++ F + TIGA+F T + + EN VKL++WDTA
Sbjct: 13 INQKLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTA 72
Query: 270 GQERFRSMAPMYYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDL 449
GQER++S+APMYYRNAN A++V+DIT S K W+KELQ PE +V+++ GNK DL
Sbjct: 73 GQERYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEGIVIALAGNKLDL 132
Query: 450 -ESLRAVPYNEATQYAATIGAAYCETSALHDQGIEKVF 560
+ RAV +A YAA + ETSA + + ++F
Sbjct: 133 AQERRAVEKADAEAYAAEANLLFFETSAKTAENVNELF 170
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 140 bits (340), Expect = 1e-34
Identities = 66/154 (42%), Positives = 99/154 (64%)
Frame = +3
Query: 102 KIVVLGSQGVGKTSLVVRYIGKMFSKHVSPTIGASFFTCNISVENARVKLQVWDTAGQER 281
K V++G GVGK++L++R+ F+ TIG F T NI ++N ++K Q+WDTAGQER
Sbjct: 12 KTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQER 71
Query: 282 FRSMAPMYYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDLESLR 461
+R++ YYR A AL+V+DIT SF + W+KEL+ + +V+ +VGNK+DL LR
Sbjct: 72 YRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTDLLHLR 131
Query: 462 AVPYNEATQYAATIGAAYCETSALHDQGIEKVFK 563
AV EA +AA ++ ETSA+ +E+ F+
Sbjct: 132 AVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQ 165
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 126 bits (305), Expect = 2e-30
Identities = 59/157 (37%), Positives = 97/157 (61%)
Frame = +3
Query: 102 KIVVLGSQGVGKTSLVVRYIGKMFSKHVSPTIGASFFTCNISVENARVKLQVWDTAGQER 281
K+V LG Q VGKTSL+ R++ F TIG F + + +E+ V+LQ+WDTAGQER
Sbjct: 13 KLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 72
Query: 282 FRSMAPMYYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDLESLR 461
FRS+ P Y R+++ A++V+DIT+ SF + W++++++ + +++ +VGNK+DL R
Sbjct: 73 FRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIEDVRAERGDDVIIVLVGNKTDLADKR 132
Query: 462 AVPYNEATQYAATIGAAYCETSALHDQGIEKVFKNTA 572
V E + A + + ETSA ++ +F+ A
Sbjct: 133 QVTQEEGEKKAKELKIMHMETSAKAGHNVKLLFRKIA 169
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 126 bits (304), Expect = 3e-30
Identities = 56/153 (36%), Positives = 92/153 (60%)
Frame = +3
Query: 102 KIVVLGSQGVGKTSLVVRYIGKMFSKHVSPTIGASFFTCNISVENARVKLQVWDTAGQER 281
K++++G GVGK+ L++R+ +++ TIG F +E VKLQ+WDTAGQER
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQER 69
Query: 282 FRSMAPMYYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDLESLR 461
FR++ YYR A+ ++V+D+T SF +K W++E+ E + +VGNKSD+ +
Sbjct: 70 FRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKSDMVDKK 129
Query: 462 AVPYNEATQYAATIGAAYCETSALHDQGIEKVF 560
V Y+ A ++A ++ + ETSA +E+ F
Sbjct: 130 VVEYSVAKEFADSLNIPFLETSAKDSTNVEQAF 162
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 120 bits (288), Expect = 2e-28
Identities = 61/159 (38%), Positives = 98/159 (61%), Gaps = 6/159 (3%)
Frame = +3
Query: 102 KIVVLGSQGVGKTSLVVRYIGKMFSKHVSPTIGASFFTCNISV----ENARVKLQVWDTA 269
KIV+ G G GK+ L+ R++ + VS T+G F + ISV + R+KLQ+WDTA
Sbjct: 11 KIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIKLQIWDTA 70
Query: 270 GQERFRSMAPMYYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDL 449
GQE+FRS+A YYR A A+LV+D+T+ SF + W+ ++++ P + + + G+KSDL
Sbjct: 71 GQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEELSSWLSDIRAMAPSTICVVLAGSKSDL 130
Query: 450 ESLRAVPYNEATQYAAT--IGAAYCETSALHDQGIEKVF 560
++ R V EA ++ + I +A+ ETS+ +E+ F
Sbjct: 131 QNQRQVSTEEAAEFCSEKHISSAH-ETSSYTGSNVEECF 168
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 118 bits (284), Expect = 7e-28
Identities = 53/153 (34%), Positives = 88/153 (57%)
Frame = +3
Query: 102 KIVVLGSQGVGKTSLVVRYIGKMFSKHVSPTIGASFFTCNISVENARVKLQVWDTAGQER 281
K++++G GVGK+ L++R+ F+ TIG F I ++ R+KLQ+WDTAGQER
Sbjct: 11 KLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQER 70
Query: 282 FRSMAPMYYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDLESLR 461
FR++ YYR A LL++D+T +SF ++ W ++ + E + ++GNK D E R
Sbjct: 71 FRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKCDCEDQR 130
Query: 462 AVPYNEATQYAATIGAAYCETSALHDQGIEKVF 560
V + + A +G + E SA + +++ F
Sbjct: 131 QVSFEQGQALADELGVKFLEASAKTNVNVDEAF 163
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 117 bits (282), Expect = 1e-27
Identities = 62/163 (38%), Positives = 97/163 (59%), Gaps = 6/163 (3%)
Frame = +3
Query: 102 KIVVLGSQGVGKTSLVVRYIGKMFSKHVSPTIGASFFTCNISVENARVKLQVWDTAGQER 281
K+++LG GVGKTS++ +Y+ + FSK TIGA F T + V++ V LQ+WDTAGQER
Sbjct: 10 KVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAGQER 69
Query: 282 FRSMAPMYYRNANAALLVFDITSMQSFTAIKGWVKE--LQSNV--PEAMVLSVVGNKSDL 449
F+S+ +YR A+ +LV+D+ + +SF + W E +Q++ PE ++GNK D+
Sbjct: 70 FQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFPFILLGNKVDV 129
Query: 450 -ESLRAVPYNEATQYAATIG-AAYCETSALHDQGIEKVFKNTA 572
E R V ++A + G Y ETSA +++ F+ A
Sbjct: 130 EEQKRMVSKSKALAFCQARGEIPYFETSAKEAINVQEAFETVA 172
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 108 bits (260), Expect = 6e-25
Identities = 58/169 (34%), Positives = 100/169 (59%), Gaps = 7/169 (4%)
Frame = +3
Query: 87 KVIEAKIVVLGSQGVGKTSLVVRYIGKMFSKHVSPTIGASFFTCNISVENARVKLQVWDT 266
K + K+V+LG GVGKT L+ +++ + FS+ TIGA F T ++ V++ V LQ+WDT
Sbjct: 5 KRVFLKVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDT 64
Query: 267 AGQERFRSMAPMYYRNANAALLVFDITSMQSFTAIKGWVKEL--QSNVPE-AMVLSVVGN 437
AGQERF+S+ +YR A+ ++V+++ + +SF +++ W +E Q++ E A +VGN
Sbjct: 65 AGQERFQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTSQDECAFPFIIVGN 124
Query: 438 KSDLE-SLRAVPYNEATQYAAT---IGAAYCETSALHDQGIEKVFKNTA 572
+ D + S RAV + A Y + + E SA + + +F+ +
Sbjct: 125 QIDKDASKRAVSLHRALDYCKSKHGSNMIHFEASAKENTNVTDLFETVS 173
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 90.6 bits (215), Expect = 2e-19
Identities = 59/157 (37%), Positives = 82/157 (52%), Gaps = 2/157 (1%)
Frame = +3
Query: 96 EAKIVVLGSQGVGKTSLVVRYIGKMFSKHVSPTIGASFFT-CNISVENARVKLQVWDTAG 272
E K+VV+G GVGK++L ++ I F PTI S+ C I E A L V DTAG
Sbjct: 8 EYKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYRKKCEIDGEGAL--LDVLDTAG 65
Query: 273 QERFRSMAPMYYRNANAALLVFDITSMQSFTAIKGWVKE-LQSNVPEAMVLSVVGNKSDL 449
QE + +M Y R LLV++ITS SF I + ++ L+ + + +V NK DL
Sbjct: 66 QEEYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVLVANKCDL 125
Query: 450 ESLRAVPYNEATQYAATIGAAYCETSALHDQGIEKVF 560
E+ R V E Q A ++ Y ETSA +E+ F
Sbjct: 126 EAERVVSRAEGEQLAKSMHCLYVETSAKLRLNVEEAF 162
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 86.2 bits (204), Expect = 3e-18
Identities = 46/163 (28%), Positives = 82/163 (50%), Gaps = 6/163 (3%)
Frame = +3
Query: 93 IEAKIVVLGSQGVGKTSLVVRYIGKMFSKHVSPTIGASFFTCNISVENARVKLQVWDTAG 272
+ K+ ++G +GKTSL+V Y+ F + + T+G +F IS+ N + +WD G
Sbjct: 9 VTIKVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDLGG 68
Query: 273 QERFRSMAPMYYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSD-- 446
Q F +M PM +A A L +FD++ + +IK W ++ + A+ + ++G K D
Sbjct: 69 QREFVNMLPMVCNDAVAILFMFDLSRKSTLNSIKEWYRQARGFNKTAVPI-LIGTKYDHF 127
Query: 447 ----LESLRAVPYNEATQYAATIGAAYCETSALHDQGIEKVFK 563
E + +A +YA + A+ S H ++K+FK
Sbjct: 128 MTFPREDQEEIT-KQARRYAKAMKASLVFCSTSHSINVQKIFK 169
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 85.0 bits (201), Expect = 8e-18
Identities = 54/155 (34%), Positives = 81/155 (52%), Gaps = 1/155 (0%)
Frame = +3
Query: 102 KIVVLGSQGVGKTSLVVRYIGKMFSKHVSPTIGASFFTCNISVENARVKLQVWDTAGQER 281
+I VLGS+ VGK+SL V+Y+ F + PTI + F+ NI + ++ DTAGQ+
Sbjct: 8 RIAVLGSRSVGKSSLTVQYVENHFVESYYPTI-ENTFSKNIKYKGQEFATEIIDTAGQDE 66
Query: 282 FRSMAPMYYRNANAALLVFDITSMQSFTAIK-GWVKELQSNVPEAMVLSVVGNKSDLESL 458
+ + + + +LV+ ITS SF +K K L E + + VVGNKSDL
Sbjct: 67 YSILNSKHSIGIHGYVLVYSITSKSSFEMVKIVRDKILNHTGTEWVPIVVVGNKSDLHMQ 126
Query: 459 RAVPYNEATQYAATIGAAYCETSALHDQGIEKVFK 563
RAV E A A+ E SA H++ + + F+
Sbjct: 127 RAVTAEEGKALANEWKCAWTEASARHNENVARAFE 161
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 84.2 bits (199), Expect = 1e-17
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 14/168 (8%)
Frame = +3
Query: 102 KIVVLGSQGVGKTSLVVRYIGKMFSKHVSPTIGASFFTCNISVENARV-KLQVWDTAGQE 278
K+VV+G G GKT L++ + F + PT+ ++ T N++V +L +WDTAGQE
Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQE 75
Query: 279 RFRSMAPMYYRNANAALLVFDITSMQSFTAI-KGWVKELQSNVPEAMVLSVVGNKSDL-- 449
+ + P+ Y N+N LL F I S + + W E+Q P ++ +VG K+DL
Sbjct: 76 EYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYPEVQHFCPRTPIV-LVGLKADLRK 134
Query: 450 ----------ESLRAVPYNEATQYAATIGAAYCETSALHDQGIEKVFK 563
+ L V Y +A A ++ A Y E SA + G+ +VF+
Sbjct: 135 DRNATEVLRTQGLTPVTYQQAQSVALSMNAPYVECSAKENTGVNEVFQ 182
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 77.4 bits (182), Expect = 2e-15
Identities = 50/174 (28%), Positives = 84/174 (48%), Gaps = 9/174 (5%)
Frame = +3
Query: 78 NKMKVIEAKIVVLGSQGVGKTSLVVRYIGKMFSKHVSPTIGASFFTCNISVENARVKLQV 257
+K K I KIV+LG GKTSL+ + F + PTI ++ +I V+ ++L +
Sbjct: 7 SKKKPIYRKIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENYIH-DIFVDGNSIELSL 65
Query: 258 WDTAGQERFRSMAPMYYRNANAALLVFDITSMQSF-TAIKGWVKELQSNVPEAMVLSVV- 431
WDTAGQE + + + Y + + ++ F + S S I W+ E+ SN P ++ V
Sbjct: 66 WDTAGQEEYDQLRSLSYSDTHVIMICFAVDSRDSLENVITKWLPEVSSNCPGVKLVLVAL 125
Query: 432 ------GNKSDLESLRAVPYNEATQYAATIGAA-YCETSALHDQGIEKVFKNTA 572
++ ++ + + Y E A I A Y E SA ++G+ + F A
Sbjct: 126 KCDLRGADEEQVDHSKIIDYEEGLAAAKKINAVRYLECSAKLNRGVNEAFTEAA 179
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 73.3 bits (172), Expect = 3e-14
Identities = 42/153 (27%), Positives = 72/153 (47%)
Frame = +3
Query: 102 KIVVLGSQGVGKTSLVVRYIGKMFSKHVSPTIGASFFTCNISVENARVKLQVWDTAGQER 281
K+V++G G GKT+ V R++ F K T+G + + VWDTAGQE+
Sbjct: 11 KLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAGQEK 70
Query: 282 FRSMAPMYYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDLESLR 461
+ YY +++FD+TS ++ + W ++L V E + + + GNK D++ +
Sbjct: 71 LGGLRDGYYIQGQCGIIMFDVTSRITYKNVPHWWRDL-VRVCENIPIVLCGNKVDVKERK 129
Query: 462 AVPYNEATQYAATIGAAYCETSALHDQGIEKVF 560
+A + Y + SA + EK F
Sbjct: 130 VKA--KAITFHRKKNLQYYDISAKSNYNFEKPF 160
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 73.3 bits (172), Expect = 3e-14
Identities = 47/173 (27%), Positives = 91/173 (52%), Gaps = 13/173 (7%)
Frame = +3
Query: 93 IEAKIVVLGSQGVGKTSLVVRYIGKMFSKHVSPTIGASFFTCNISVENARVKLQVWDTAG 272
+ K+V++G GKT L++ + F + PT+ ++ ++ V+ ++L +WDTAG
Sbjct: 5 LRRKLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENY-VADVEVDGRHIELALWDTAG 63
Query: 273 QERFRSMAPMYYRNANAALLVFDITSMQSFTAI-KGWVKELQ---SNVPEAMVLSVVGNK 440
QE + + P+ Y +++ L+ F + + +S + + W+ E+ SN+P +V V +
Sbjct: 64 QEDYDRLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISEVLHFCSNLPILLVGCKVDLR 123
Query: 441 SD---LESL-----RAVPYNEATQYAATIGA-AYCETSALHDQGIEKVFKNTA 572
+D +E L + + + E A IGA Y E SA ++G+ +VF+ A
Sbjct: 124 NDPKTIEELSKTSQKPITFEEGQVVAQKIGAYKYLECSAKLNEGVNEVFETAA 176
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 73.3 bits (172), Expect = 3e-14
Identities = 55/171 (32%), Positives = 85/171 (49%), Gaps = 14/171 (8%)
Frame = +3
Query: 93 IEAKIVVLGSQGVGKTSLVVRYIGKMFSKHVSPTIGASFFTCNISVENARVKLQVWDTAG 272
I K+VV+G GKTSL+ + F PT+ ++ + + V+ V+L +WDTAG
Sbjct: 7 IRRKLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENYVS-DCRVDGKSVQLALWDTAG 65
Query: 273 QERFRSMAPMYYRNANAALLVFDITSMQSFTAIK-GWVKELQSNVPEAMVLSVVGNKSDL 449
QE + + PM Y A+ L+ F I S S + W++E+ + P + +VG K+DL
Sbjct: 66 QEEYERLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEEINTLCPNVPFI-LVGMKADL 124
Query: 450 -------ESLRA-----VPYNEATQYAATIGA-AYCETSALHDQGIEKVFK 563
E +R V +A A IGA Y E S+L G++ VF+
Sbjct: 125 RSDPVAIEEMRRRNQNFVKSQQAELVAQRIGARKYMECSSLTGDGVDDVFE 175
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 68.5 bits (160), Expect = 7e-13
Identities = 51/172 (29%), Positives = 80/172 (46%), Gaps = 14/172 (8%)
Frame = +3
Query: 102 KIVVLGSQGVGKTSLVVRYIGKMFSKHVSPTIGASFFTCNISVENARVKLQVWDTAGQER 281
K VV+G VGKT L++ Y F PT+ ++ + + + L ++DTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNY-AVTVMIGDEPYTLGLFDTAGQED 63
Query: 282 FRSMAPMYYRNANAALLVFDITSMQSFTAIK-GWVKELQSNVPEAMVLSVVGNKSDLESL 458
+ + P+ Y + L+ F +TS SF +K W E+ + P L +VG + DL
Sbjct: 64 YDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPEVHHHCPGVPCL-IVGTQIDLRDD 122
Query: 459 RAVPYNEATQY------------AATIGAA-YCETSALHDQGIEKVFKNTAI 575
+V A Q+ A +GA Y E SAL +G++ VF +
Sbjct: 123 PSVQQKLARQHQHPLTHEQGERLARELGAVKYVECSALTQKGLKNVFDEAIV 174
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 67.7 bits (158), Expect = 1e-12
Identities = 47/171 (27%), Positives = 87/171 (50%), Gaps = 13/171 (7%)
Frame = +3
Query: 93 IEAKIVVLGSQGVGKTSLVVRYIGKMFSKHVSPTIGASFFTCNISVENARVKLQVWDTAG 272
+ K+V++G GKT L++ + F + PT+ ++ ++ V+ V+L +WDTAG
Sbjct: 5 LRRKLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENY-VADVEVDGRHVELALWDTAG 63
Query: 273 QERFRSMAPMYYRNANAALLVFDITSMQSFTAI-KGWVKELQ---SNVPEAMVLSVVGNK 440
QE + + P+ Y +++ L+ F + S S + + W+ E+ S++P +V +
Sbjct: 64 QEDYDRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEVLHFCSSLPILLVACKADLR 123
Query: 441 SD---LESL-----RAVPYNEATQYAATIGA-AYCETSALHDQGIEKVFKN 566
+D +E L V E A IGA Y E SA ++G+ +VF++
Sbjct: 124 NDPKIIEELSKTNQHPVTTEEGQAVAQKIGAYKYLECSAKTNEGVREVFES 174
>SPAC22F3.05c |alp41||ADP-ribosylation factor
Alp41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 186
Score = 46.4 bits (105), Expect = 3e-06
Identities = 35/126 (27%), Positives = 62/126 (49%), Gaps = 3/126 (2%)
Frame = +3
Query: 81 KMKVIEAKIVVLGSQGVGKTSLVVRYIGKMFSKHVSPTIGASFFTCNISVENARVKLQVW 260
K+K E ++++LG GKT+++ + + ++ VSPT G T + VE R +W
Sbjct: 11 KLKEREVRVLLLGLDNAGKTTILKCLLNEDVNE-VSPTFGFQIRT--LEVEGLR--FTIW 65
Query: 261 DTAGQERFRSMAPMYYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLS---VV 431
D GQ+ R+ Y+ + A + V D + ++EL V E ++ + V+
Sbjct: 66 DIGGQKTLRNFWKNYFESTEAIIWVVDSLDDLRLEECRNTLQELL--VEEKLLFTSILVL 123
Query: 432 GNKSDL 449
NKSD+
Sbjct: 124 ANKSDV 129
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 46.4 bits (105), Expect = 3e-06
Identities = 31/121 (25%), Positives = 61/121 (50%), Gaps = 3/121 (2%)
Frame = +3
Query: 96 EAKIVVLGSQGVGKTSLVVRY-IGKMFSKHVSPTIGASFFTCNISVENARVKLQVWDTAG 272
E +I+++G GKT+++ + +G++ + PTIG + T VE + VWD G
Sbjct: 17 EMRILMVGLDAAGKTTILYKLKLGEIVT--TIPTIGFNVET----VEYRNISFTVWDVGG 70
Query: 273 QERFRSMAPMYYRNANAALLVFDITSMQSFTAIKGWVKEL--QSNVPEAMVLSVVGNKSD 446
Q++ R + Y++N + V D + + ++ + + + +A++L V NK D
Sbjct: 71 QDKIRPLWRHYFQNTQGIIFVVDSNDRERISEAHEELQRMLNEDELRDALLL-VFANKQD 129
Query: 447 L 449
L
Sbjct: 130 L 130
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 42.7 bits (96), Expect = 4e-05
Identities = 31/120 (25%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Frame = +3
Query: 96 EAKIVVLGSQGVGKTSLVVRYIGKMFSKHVS-PTIGASFFTCNISVENARVKLQVWDTAG 272
E +I++LG GKT+++ + K+ V+ PT+G + T ++ +N +K VWD G
Sbjct: 21 EMRILMLGLDAAGKTTILYKL--KLNQSVVTIPTVGFNVET--VTYKN--IKFNVWDVGG 74
Query: 273 QERFRSMAPMYYRNANAALLVFDITSMQSFTAIKGWVKELQSN-VPEAMVLSVVGNKSDL 449
Q++ R + Y+ + V D + + + + S+ +L V+ NK DL
Sbjct: 75 QDKIRPLWRHYFTGTKGLIFVVDSADSNRISEARQELHRIISDREMRDCLLLVLANKQDL 134
>SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 308
Score = 40.7 bits (91), Expect = 2e-04
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 14/140 (10%)
Frame = +3
Query: 102 KIVVLGSQGVGKTSLVVRYIGKMFSKHVSPTIGASFFTCNISVENAR----VKLQVWDTA 269
K++++G G GK+S+ R I +FS +V+ T +I + R + L +WD
Sbjct: 4 KVLLMGRSGSGKSSM--RSI--VFSNYVAKDTRRLGATIDIEHSHVRFLGNLVLNLWDCG 59
Query: 270 GQERF-----RSMAPMYYRNANAALLVFDITSMQ---SFTAIKGWVKELQSNVPEAMVLS 425
GQE F + +RN + VFD+ S + + ++ +N P+A V
Sbjct: 60 GQEAFMENYLSAQRDHIFRNVQVLIYVFDVESREFERDLVTFRNCLEATVANSPQARVFC 119
Query: 426 VVGNKSDL--ESLRAVPYNE 479
++ +K DL E LR + + E
Sbjct: 120 LI-HKMDLVQEDLRDLVFEE 138
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 30.3 bits (65), Expect = 0.24
Identities = 22/81 (27%), Positives = 32/81 (39%)
Frame = +3
Query: 96 EAKIVVLGSQGVGKTSLVVRYIGKMFSKHVSPTIGASFFTCNISVENARVKLQVWDTAGQ 275
E ++V+ G QGVGK+SL+ I + + N N V L + DT
Sbjct: 3 EVRVVICGDQGVGKSSLISALIQEDNVTSIPKVFPIISIPSNPD-SNDDVSLVLVDTQSD 61
Query: 276 ERFRSMAPMYYRNANAALLVF 338
R + AN LV+
Sbjct: 62 SNEREYLAAEIKKANVICLVY 82
>SPAC23H4.15 |||ribosome biogenesis protein Tsr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 29.9 bits (64), Expect = 0.32
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = -2
Query: 532 SADVSQ*AAPMVAAYCVASL*GTALRDSRSLLLPTTDNTIASGTLLCSSLTQ 377
+ADVSQ A ++ A C + G RDSRS LL + + + ++G LL + +
Sbjct: 223 AADVSQDALNVMRALCTSHPRGIHWRDSRSYLL-SQEISYSNGNLLVRGIVR 273
>SPBC12C2.08 |dnm1||dynamin Dnm1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 781
Score = 27.9 bits (59), Expect = 1.3
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +3
Query: 105 IVVLGSQGVGKTSLVVRYIGKMF 173
IVV+GSQ GK+S++ +GK F
Sbjct: 29 IVVVGSQSCGKSSVLENIVGKDF 51
>SPAC57A7.05 |||conserved protein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1337
Score = 27.5 bits (58), Expect = 1.7
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 285 RSMAPMYYRNANAALLVFDITSMQSFTA 368
RS A YYRN ++ I S+Q FTA
Sbjct: 938 RSSAGWYYRNRGLWAVILAIMSLQRFTA 965
>SPAC1834.05 |alg9||mannosyltransferase complex subunit Alg9
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 577
Score = 27.1 bits (57), Expect = 2.3
Identities = 16/31 (51%), Positives = 17/31 (54%)
Frame = +1
Query: 154 VTSGRCSRSTSHLPSERLSSRVTLAWKTQES 246
V SG S STS LPS + VTLA Q S
Sbjct: 134 VNSGMWSASTSFLPSSFAMNMVTLALSAQLS 164
>SPBC1718.06 |msp1|mgm1|mitochondrial GTPase
Msp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 903
Score = 26.6 bits (56), Expect = 3.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 78 NKMKVIEAKIVVLGSQGVGKTSLVVRYIGKMF 173
N V IVV+GSQ GK+S++ +G F
Sbjct: 257 NNSAVTLPSIVVIGSQSSGKSSVLEAIVGHEF 288
>SPAC328.04 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 741
Score = 26.6 bits (56), Expect = 3.0
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +1
Query: 187 HLPSERLSSRVTLAWKTQESNSRSGTRLVRRGSGQWPRCTTEMPT-RRSWSSTSRACKAS 363
H P+ S+ + A +T S S S + ++ P TTE+P+ + S +S +
Sbjct: 265 HRPTPDNSAVIEAARRTYSSISSSSSPFKKKTQSHLPNRTTEVPSISKQLSKSSTSIATV 324
Query: 364 QPSRA 378
PS A
Sbjct: 325 APSLA 329
>SPBC16D10.04c |dna2||DNA replication endonuclease-helicase
Dna2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1398
Score = 26.2 bits (55), Expect = 3.9
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = +3
Query: 81 KMKVIEAKIVVLGSQGVGKTSLVVRYIGKMFSKHVSPTIGASFFTCNISVENARVKLQVW 260
K E ++LG G GKT+ + I + +K I + FT +++V+N +KL+
Sbjct: 943 KCHAAEHYSLILGMPGTGKTTTISSLIRSLLAK--KKKILLTSFT-HLAVDNILIKLKGC 999
Query: 261 DT 266
D+
Sbjct: 1000 DS 1001
>SPCC594.05c |||COMPASS complex subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 424
Score = 26.2 bits (55), Expect = 3.9
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = +1
Query: 295 PRCTTEMPTRRSWSSTSRACKASQPSRAGSKNC 393
P+CT E +W R + S P+R S C
Sbjct: 163 PKCTEEGKGITTWKRKCRLRECSNPTRPNSNYC 195
>SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1016
Score = 25.8 bits (54), Expect = 5.2
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = -2
Query: 199 PMVGETCFENIFPM*RTTKLVLPTPCDPSTTILASITFILL--NNY 68
P+ + +I P TT + PTP STT A T + L +NY
Sbjct: 840 PVQSSSTTSSITPTPTTTSSITPTPTTTSTTTTAQSTGMQLCGSNY 885
>SPAC222.14c |||GTP binding protein Sey1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 762
Score = 25.8 bits (54), Expect = 5.2
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 105 IVVLGSQGVGKTSLVVRYIGKMFS 176
+ VLGSQ GK++L+ G FS
Sbjct: 42 VAVLGSQSTGKSTLLNNLFGTSFS 65
>SPBC17D11.02c |||synoviolin homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 677
Score = 25.4 bits (53), Expect = 6.9
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +3
Query: 360 FTAIKGWVKELQSNVPEAMVLSVVGNKSDLESLRAVPYNEATQYAATI 503
F ++ W+ E Q P SV+GN+S + A P ATQ A +
Sbjct: 334 FHCLRNWL-ERQQTCPICR-RSVIGNQSSPTGIPASPNVRATQIATQV 379
>SPAC26F1.13c |||leucine-tRNA ligase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1111
Score = 25.4 bits (53), Expect = 6.9
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Frame = +1
Query: 130 WAKRAWSCVTSGRCSRSTSHLPSERLSSRVTLAWKTQESNSRS---GTRL 270
+ + +W VT R + P R TL W +Q + +RS GTRL
Sbjct: 558 YGEASWKAVTEKALDRLNTFSPEVRNGFLKTLDWLSQWACARSYGLGTRL 607
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 25.0 bits (52), Expect = 9.1
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 5/31 (16%)
Frame = +3
Query: 72 LFNKMKVIEA-----KIVVLGSQGVGKTSLV 149
L N KV+ A I++ GS GVGKTSL+
Sbjct: 1546 LMNASKVLRALQVLKPILLEGSPGVGKTSLI 1576
>SPAC10F6.14c |||ABC1 kinase family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 535
Score = 25.0 bits (52), Expect = 9.1
Identities = 21/106 (19%), Positives = 42/106 (39%)
Frame = +3
Query: 78 NKMKVIEAKIVVLGSQGVGKTSLVVRYIGKMFSKHVSPTIGASFFTCNISVENARVKLQV 257
NK K ++ + V +G+ G+G + Y ++ + AS + + + K
Sbjct: 43 NKRKWMK-RFVFVGAAGIGVYAWDRVYNAHALTRSIRTVYTASIIAADYKLNFSEKKADK 101
Query: 258 WDTAGQERFRSMAPMYYRNANAALLVFDITSMQSFTAIKGWVKELQ 395
D Q + + Y+N + + I +MQS + + K Q
Sbjct: 102 IDALHQRVAQRLFKTIYKNGGLYIKMGQIIAMQSNNLPEAYGKAFQ 147
>SPCC417.08 |tef3||translation elongation factor
eEF3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1047
Score = 25.0 bits (52), Expect = 9.1
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +3
Query: 93 IEAKIVVLGSQGVGKTSLVVRYIGKMFSKHVSPTIG 200
+ ++I V+G G GK++L+ K+ + + PT+G
Sbjct: 699 LSSRIAVIGPNGAGKSTLI-----KVLTGELLPTVG 729
>SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1057
Score = 25.0 bits (52), Expect = 9.1
Identities = 8/26 (30%), Positives = 18/26 (69%)
Frame = +3
Query: 93 IEAKIVVLGSQGVGKTSLVVRYIGKM 170
+ +++ +LG G GK++L+ IG++
Sbjct: 718 LSSRVAILGPNGAGKSTLIKVLIGEV 743
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,699,421
Number of Sequences: 5004
Number of extensions: 56618
Number of successful extensions: 222
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 201
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 207
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 281707720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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