Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte22d22
(722 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1726 - 29062654-29064414 33 0.30
11_06_0656 + 25926192-25926289,25927530-25927659,25928248-259282... 31 0.93
04_04_1355 + 32851514-32851696,32852132-32852224,32852334-328524... 30 1.6
03_02_0254 + 6862762-6863663,6863994-6864241,6864323-6864465,686... 30 2.1
01_01_0907 + 7128397-7128497,7129944-7130022,7130470-7130568,713... 30 2.1
05_01_0224 - 1662818-1663033,1663183-1663266,1663315-1663434,166... 29 2.8
02_05_0672 + 30775458-30775523,30775594-30775662,30775748-307757... 29 2.8
01_06_1368 - 36715630-36715698,36715835-36716284 29 2.8
06_03_0392 + 20318728-20319309,20319596-20319725,20319844-203198... 29 3.7
06_01_0747 - 5587261-5587356,5587472-5587855,5588133-5588192,558... 29 4.9
02_05_0204 - 26721498-26721545,26721731-26721823,26723822-267239... 29 4.9
08_01_0763 + 7324193-7324558,7325376-7325450 28 6.5
02_05_0616 - 30380558-30380822,30380914-30381045,30381138-303812... 28 6.5
12_02_0990 + 25073910-25074734 28 8.6
10_01_0211 - 2268191-2268247,2268916-2268944,2270892-2271777 28 8.6
09_06_0374 + 22649455-22650024,22650085-22650637,22650812-226511... 28 8.6
09_04_0574 + 18645363-18645870,18645995-18646491,18646631-186466... 28 8.6
08_01_0111 + 850047-850218,850366-850649,851017-851763 28 8.6
05_06_0276 + 26878732-26879574,26879920-26880387,26880800-268810... 28 8.6
04_04_0406 + 24978845-24978970,24979073-24979142,24979541-249795... 28 8.6
03_02_0517 + 9054816-9055655 28 8.6
03_01_0161 + 1307206-1307769,1307979-1308101,1308182-1308286,130... 28 8.6
01_06_1678 - 39095986-39096205,39096400-39096477,39096578-390969... 28 8.6
01_05_0638 - 23871424-23871974,23872154-23872325 28 8.6
>07_03_1726 - 29062654-29064414
Length = 586
Score = 32.7 bits (71), Expect = 0.30
Identities = 22/62 (35%), Positives = 24/62 (38%), Gaps = 6/62 (9%)
Frame = +3
Query: 189 GGDGETSGLADTPKLSGQEL------AFYQACMQHTRPPDCRCPQYSGGEMPQLPPGKEG 350
G DG+ G A S EL + A MQH PP R P G P P G E
Sbjct: 197 GCDGDAGGAAPAGPHSLHELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPEGSEA 256
Query: 351 GW 356
W
Sbjct: 257 WW 258
>11_06_0656 +
25926192-25926289,25927530-25927659,25928248-25928294,
25929274-25929388,25929504-25929753,25930079-25930239,
25930372-25930567,25930672-25930836,25930918-25931070,
25931160-25931248,25931385-25931423,25931460-25931681,
25933503-25934165
Length = 775
Score = 31.1 bits (67), Expect = 0.93
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = +1
Query: 277 RGRPTADARSTLEGRCRNCRLGRRAAG 357
RGR A AR GRCR R GR A G
Sbjct: 662 RGRRGAGARPAARGRCRRGRRGRAAGG 688
>04_04_1355 +
32851514-32851696,32852132-32852224,32852334-32852485,
32852702-32852837,32852947-32853102,32853233-32853312,
32853475-32853568
Length = 297
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/52 (32%), Positives = 29/52 (55%)
Frame = -3
Query: 546 RSFA*ALETLRSGGCCTALGISIEAYLKMHWADRSEMLEFQDSQRLARDTVL 391
R +A AL+ SGG L ++++ L+MH +D +E + + Q+L D L
Sbjct: 126 RDYAGALKHTNSGGTMELLAMNVQICLQMHRSDHAEK-QLRIMQQLDEDHTL 176
>03_02_0254 +
6862762-6863663,6863994-6864241,6864323-6864465,
6864532-6864570,6865403-6865501
Length = 476
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/52 (32%), Positives = 29/52 (55%)
Frame = +3
Query: 75 IENEQFKILV*TDKHTNKMDHYLTTYRKDYLWPNLPHVGGDGETSGLADTPK 230
+EN ++ ++ TD +T + Y+ ++R WPNLP + G +SGL K
Sbjct: 349 LENPRWYVVWSTDMNTRILPEYVVSFR----WPNLPQMEG---SSGLGSKLK 393
>01_01_0907 +
7128397-7128497,7129944-7130022,7130470-7130568,
7130654-7130767,7130960-7131102,7131716-7131797,
7132425-7132510,7132879-7133112,7134684-7135162,
7135309-7136027
Length = 711
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = +3
Query: 597 PGAKFEGLQRAADDSGSGPC---AQPMRLPGDPCRVGPKPRMTTP 722
PG +F G+Q + G+ P AQPM +PG P+PRM P
Sbjct: 579 PGMQFPGMQ-PSPMPGAQPVMMYAQPMMMPGMQFAAMPQPRMYGP 622
>05_01_0224 -
1662818-1663033,1663183-1663266,1663315-1663434,
1664527-1664655,1664743-1664988
Length = 264
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/45 (31%), Positives = 18/45 (40%)
Frame = +3
Query: 270 QHTRPPDCRCPQYSGGEMPQLPPGKEGGWSRNEIMGPLLDPKLYP 404
+H PP R P G P P G E W + + P P +P
Sbjct: 193 KHYDPPQRRFPLEKGVPPPWWPEGTEAWWPESVMPSPSWPPPSFP 237
>02_05_0672 +
30775458-30775523,30775594-30775662,30775748-30775797,
30775869-30775929,30776016-30776381,30776542-30776754,
30776826-30777056,30777502-30777615,30777703-30778495,
30778535-30778905,30779007-30779378,30779448-30780438,
30781068-30781141,30781953-30782030,30782448-30782525
Length = 1308
Score = 29.5 bits (63), Expect = 2.8
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -3
Query: 702 WVRRGKGPQEAAWAARRGPTHCHRLLAA 619
W+ + Q + A R GP HC+ L +A
Sbjct: 715 WISKASASQRSGRAGRTGPGHCYHLYSA 742
>01_06_1368 - 36715630-36715698,36715835-36716284
Length = 172
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/38 (44%), Positives = 19/38 (50%)
Frame = -3
Query: 375 PLSHSDSSRPPSQAAVAASPLQSTAGIGSRAASYAACM 262
P S S S+ S AAVAASPL G G + A M
Sbjct: 29 PASASTSTSTSSSAAVAASPLAQAHGAGEPRRLFEAFM 66
>06_03_0392 +
20318728-20319309,20319596-20319725,20319844-20319895,
20319995-20320061,20320547-20320633,20322526-20322567,
20322635-20322740,20323155-20323219,20323299-20323343,
20323442-20323549,20323636-20323723,20324147-20324193,
20324355-20324363
Length = 475
Score = 29.1 bits (62), Expect = 3.7
Identities = 21/69 (30%), Positives = 27/69 (39%), Gaps = 11/69 (15%)
Frame = +3
Query: 300 PQYSGGEMPQLPPGKEGG------WSRNEIM-----GPLLDPKLYPVRVAASPETPTSRY 446
P G P PP + G W+R E+ GP + P YP RVA PE +
Sbjct: 69 PSDDPGSRPPPPPRRSQGPPQRQQWTREEMRFVKDAGPSITPVSYPARVAPLPEDRPAEE 128
Query: 447 DQPNAFLDK 473
P D+
Sbjct: 129 APPEGPADE 137
>06_01_0747 - 5587261-5587356,5587472-5587855,5588133-5588192,
5588428-5588484,5588663-5588800,5588901-5588966,
5589234-5589452,5589522-5589737,5589813-5589884,
5589952-5590205,5590356-5590525,5590840-5591029,
5592211-5592331,5592838-5592921,5593003-5593365,
5594530-5594724,5594938-5595933,5596329-5596370
Length = 1240
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +3
Query: 555 RNKTTY--RVDYCETGPGAKFEGLQRAADDSGSG 650
RN Y R YC +GPGA E + ++S SG
Sbjct: 1096 RNSIAYSTRTSYCGSGPGASSESATTSVNNSYSG 1129
>02_05_0204 -
26721498-26721545,26721731-26721823,26723822-26723931,
26724029-26724129,26724691-26724917
Length = 192
Score = 28.7 bits (61), Expect = 4.9
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +2
Query: 479 IEIPNAVQHPPERSVSRAQAKDRQRSKQDHLQGR 580
I +PNA HP +V RA R R HL GR
Sbjct: 8 IVVPNACSHPRNDAVPRA-GSSRSRRSSLHLAGR 40
>08_01_0763 + 7324193-7324558,7325376-7325450
Length = 146
Score = 28.3 bits (60), Expect = 6.5
Identities = 21/71 (29%), Positives = 30/71 (42%)
Frame = +2
Query: 227 KTVWSRISVLPSMHAAYEAARLPMPAVLWRGDAATAAWEGGRLESE*DNGSSPRSKTVSR 406
+ + S+ S PS+H P A W + AAW GG+ G + R VSR
Sbjct: 64 RPIQSQPSSHPSLHEDGGDGDKPFKAEDWHQGGSNAAWRGGK-------GGTGRRGGVSR 116
Query: 407 ASRCES*NSNI 439
SR + N+
Sbjct: 117 MSRGRAETHNL 127
>02_05_0616 -
30380558-30380822,30380914-30381045,30381138-30381279,
30381377-30381569,30381657-30381890,30381992-30382189
Length = 387
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -3
Query: 354 SRPPSQAAVAASPLQSTAGIGSRAASYAACMLGRT 250
S PP+QAA ASP ++ A AA+ + +L T
Sbjct: 13 SPPPAQAAARASPRRAPASAAPVAAAISTALLALT 47
>12_02_0990 + 25073910-25074734
Length = 274
Score = 27.9 bits (59), Expect = 8.6
Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Frame = +3
Query: 540 RIDRDRNKTTYRVDYC-ETGPGAKFEGLQRAADDSGSGPCAQPMRLPGDPCRVGPKPR 710
R+ + T +R D C E G GA+F D CA P+ P P R PR
Sbjct: 15 RLRLEHADTPFRCDGCREVGIGARFRCPFAGCDHDLHRQCALPLSPPPPPLRHPFYPR 72
>10_01_0211 - 2268191-2268247,2268916-2268944,2270892-2271777
Length = 323
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -1
Query: 566 GLVSISVDPLLELWRRFVLEDAVQHWVFR 480
GLV++S D L ++W R V + V WV +
Sbjct: 197 GLVTLSYDSL-QIWERKVCSEGVTRWVLQ 224
>09_06_0374 +
22649455-22650024,22650085-22650637,22650812-22651147,
22651171-22652605,22652939-22653062
Length = 1005
Score = 27.9 bits (59), Expect = 8.6
Identities = 19/60 (31%), Positives = 25/60 (41%)
Frame = +3
Query: 183 HVGGDGETSGLADTPKLSGQELAFYQACMQHTRPPDCRCPQYSGGEMPQLPPGKEGGWSR 362
H G G G TP+ G+ +RP D R + GG P PP + GG +R
Sbjct: 293 HDGAGGSRRGEQSTPR-GGRASGSRDRGPGSSRPADARGKRKQGGTPPPSPP-RGGGAAR 350
>09_04_0574 +
18645363-18645870,18645995-18646491,18646631-18646696,
18646921-18646989,18647401-18647466
Length = 401
Score = 27.9 bits (59), Expect = 8.6
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -3
Query: 375 PLSHSDSSRPPSQAAVAASP 316
P + +SS+PPS A+ AASP
Sbjct: 281 PAASKNSSKPPSSASAAASP 300
>08_01_0111 + 850047-850218,850366-850649,851017-851763
Length = 400
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = -3
Query: 366 HSDSSRPPSQAAVAASPLQSTAGIGSRAASYAACMLGRTLIL 241
H PP ++ AA+ L ST G AAS AA L+L
Sbjct: 267 HGFMKLPPLESPSAATALSSTPSTGGDAASSAAAAAADHLLL 308
>05_06_0276 +
26878732-26879574,26879920-26880387,26880800-26881021,
26881153-26881278,26881309-26881573,26881719-26881936
Length = 713
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/64 (25%), Positives = 29/64 (45%)
Frame = +2
Query: 368 DNGSSPRSKTVSRASRCES*NSNISLRSAQCIFR*ASIEIPNAVQHPPERSVSRAQAKDR 547
D GS PR + S A+R S ++S + + + + P RS+ R+ +DR
Sbjct: 25 DRGSPPRRRERSPAARSRSPRRRSPVKSTSSHRERSPVRRNGSPRRSPVRSIGRSPQRDR 84
Query: 548 QRSK 559
+ +
Sbjct: 85 VKEQ 88
>04_04_0406 +
24978845-24978970,24979073-24979142,24979541-24979556,
24979813-24979930,24980015-24980137,24980249-24980408,
24980470-24980546,24980635-24980687,24981263-24981317,
24981664-24981858
Length = 330
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Frame = -2
Query: 625 RCRPSNLAP---GPVSQ*STL*VVLFRSLSILCLSSGDA 518
RC P L P GP+++ T VVL R+ I+ ++GDA
Sbjct: 104 RCAPCVLGPVYCGPLAEGCTACVVLIRNTQIVVGNAGDA 142
>03_02_0517 + 9054816-9055655
Length = 279
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
Frame = +3
Query: 282 PPDCRCPQYSGG---EMPQLPPGKEGGWSRNEIMGPLL 386
P CP+ GG + PQ PP GG R M P++
Sbjct: 21 PSTVVCPECDGGFLEQFPQPPPRGGGGSGRRGAMNPVI 58
>03_01_0161 +
1307206-1307769,1307979-1308101,1308182-1308286,
1308688-1308867,1308988-1309050,1309151-1309345,
1309704-1309805,1309885-1309947,1310045-1310113,
1310215-1310270,1310587-1310755
Length = 562
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -2
Query: 697 PTRQGSPGSRMGCAQGPDPLSSAARCRPSNLAPGPVSQ 584
PT +P SR+ A S+A PS+ AP P S+
Sbjct: 10 PTPASTPSSRLAAAPSSRVSSAAPHPSPSSSAPTPASR 47
>01_06_1678 -
39095986-39096205,39096400-39096477,39096578-39096949,
39097374-39097671,39097867-39098077,39098331-39099023
Length = 623
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +3
Query: 282 PPDCRCPQYSGGEMPQL-PPGKEGGWSRNEIMGPLLDPKLYPVRVAASPETPTSRYD 449
PP CR P G P P ++ W N + P L P ++A P+ +R D
Sbjct: 145 PPPCRVPPPPGYRQPMAWPARRDRAWYANVEL-----PPLAPAKLAGPPDPVRARGD 196
>01_05_0638 - 23871424-23871974,23872154-23872325
Length = 240
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -2
Query: 709 RGLGPTRQGSPGSRMGCAQGPDPLSSAARCRPSNL 605
+G GP R+G P R G +GP + ++ R SN+
Sbjct: 202 KGDGPEREGGPPERGGMGRGP-RIEASRRSASSNM 235
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,247,444
Number of Sequences: 37544
Number of extensions: 615533
Number of successful extensions: 2403
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 2253
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2400
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1886372480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -