Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22d16
         (510 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40798-4|AAA81474.2|  430|Caenorhabditis elegans Hypothetical pr...    28   4.5  
Z81549-2|CAB04473.1|  167|Caenorhabditis elegans Hypothetical pr...    27   6.0  
U41271-3|AAP31439.1|  577|Caenorhabditis elegans Hypothetical pr...    27   6.0  
U41271-2|AAA82444.3|  713|Caenorhabditis elegans Hypothetical pr...    27   6.0  
Z70682-1|CAA94584.1|  363|Caenorhabditis elegans Hypothetical pr...    27   7.9  

>U40798-4|AAA81474.2|  430|Caenorhabditis elegans Hypothetical
           protein R13A1.3 protein.
          Length = 430

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 11/41 (26%), Positives = 21/41 (51%)
 Frame = +1

Query: 352 QTAITMTN*IPALFFLNIFSYVYLLLTRVNCFKCDIYYIIF 474
           + A+++    P  F     SY +L  + + C KC I+ ++F
Sbjct: 298 ENAVSLGIFCPLSFSFYFLSYAFLQTSLIACSKCSIFNLLF 338


>Z81549-2|CAB04473.1|  167|Caenorhabditis elegans Hypothetical
           protein F55C9.3 protein.
          Length = 167

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 10/31 (32%), Positives = 22/31 (70%)
 Frame = +1

Query: 232 MSSASEIYATCSIITALDVEITDKQHVPRIN 324
           +S+  ++  T ++ T +DV+I+ K+H+P+ N
Sbjct: 21  LSNIKKLAETITVPTGIDVKISIKKHMPKKN 51


>U41271-3|AAP31439.1|  577|Caenorhabditis elegans Hypothetical
           protein C46H3.2b protein.
          Length = 577

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +3

Query: 243 FRDLCDMFDYNCIRRRNYRQ-TACPEDKSMLTVSRRPTN 356
           FR  CD  DY   ++ N++  +A PE  + L+V  + T+
Sbjct: 396 FRASCDKIDYLSYQQNNWKSASALPEAPAFLSVKPKSTS 434


>U41271-2|AAA82444.3|  713|Caenorhabditis elegans Hypothetical
           protein C46H3.2a protein.
          Length = 713

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +3

Query: 243 FRDLCDMFDYNCIRRRNYRQ-TACPEDKSMLTVSRRPTN 356
           FR  CD  DY   ++ N++  +A PE  + L+V  + T+
Sbjct: 532 FRASCDKIDYLSYQQNNWKSASALPEAPAFLSVKPKSTS 570


>Z70682-1|CAA94584.1|  363|Caenorhabditis elegans Hypothetical
           protein F08G5.2 protein.
          Length = 363

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = -1

Query: 408 ENVQEKQGRNLISHRNSCLLDDGRQLASIYPRDMLFVCNFY 286
           EN  +KQG  LI +  SC+L     + + +   ++F+C FY
Sbjct: 4   ENDNKKQGWTLIDNVISCILLVYAGIVTAFICPIVFLCFFY 44


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,942,410
Number of Sequences: 27780
Number of extensions: 215989
Number of successful extensions: 525
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 525
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 988489374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)