Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte22d03
(772 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large subunit|... 46 6e-06
SPAC6B12.04c |||aminotransferase class I and II|Schizosaccharomy... 35 0.015
SPCC1223.13 |cbf12||CBF1/Su|Schizosaccharomyces pombe|chr 3|||Ma... 34 0.026
SPCC1235.05c |fft2||fun thirty related protein Fft2|Schizosaccha... 33 0.045
SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr... 31 0.18
SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase Snf22... 30 0.32
SPAC22G7.10 |||mRNA cleavage and polyadenylation specificity fac... 30 0.32
SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces pom... 30 0.42
SPCC1840.04 |||caspase|Schizosaccharomyces pombe|chr 3|||Manual 30 0.42
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 29 0.56
SPAC12G12.07c |||conserved fungal protein|Schizosaccharomyces po... 29 0.56
SPAC29B12.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 29 0.74
SPBC902.06 |mto2||MT organizer Mto2|Schizosaccharomyces pombe|ch... 29 0.97
SPCC320.07c |mde7||RNA-binding protein Mde7|Schizosaccharomyces ... 29 0.97
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 28 1.3
SPACUNK4.14 |mdb1||BRCT domain protein|Schizosaccharomyces pombe... 28 1.3
SPAC644.16 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 28 1.3
SPBC1D7.03 |mug80||cyclin Clg1 |Schizosaccharomyces pombe|chr 2|... 28 1.3
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 28 1.7
SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|ch... 27 2.2
SPAC17A5.10 |||conserved fungal protein|Schizosaccharomyces pomb... 27 2.2
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 27 2.2
SPBC2F12.09c |atf21||transcription factor Atf21|Schizosaccharomy... 27 2.2
SPAPB24D3.10c |agl1|agl|alpha-glucosidase Agl1|Schizosaccharomyc... 27 2.2
SPAC29B12.03 |spd1||ribonucleotide reductase |Schizosaccharomyce... 27 3.0
SPAPB1A10.09 |ase1||microtubule-associated protein Ase1 |Schizos... 27 3.9
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 27 3.9
SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|... 26 5.2
SPBC354.05c |sre2||membrane-tethered transcription factor |Schiz... 26 5.2
SPAC25A8.01c ||snf2SR|fun thirty related protein Fft3|Schizosacc... 26 5.2
SPBC577.13 |syj2||inositol-polyphosphate 5-phosphatase |Schizosa... 26 5.2
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 26 5.2
SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein 4|Schizosacc... 26 5.2
SPBC12D12.01 |sad1|SPBC16H5.01c|spindle pole body protein Sad1|S... 26 5.2
SPAC5D6.12 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 26 6.9
SPBC685.03 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 6.9
SPAC22E12.11c |set3||histone lysine methyltransferase Set3|Schiz... 26 6.9
SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p... 25 9.1
SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6 family|Schi... 25 9.1
SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyce... 25 9.1
SPCC736.12c |||conserved protein|Schizosaccharomyces pombe|chr 3... 25 9.1
>SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1752
Score = 46.0 bits (104), Expect = 6e-06
Identities = 43/148 (29%), Positives = 73/148 (49%), Gaps = 11/148 (7%)
Frame = +3
Query: 318 PGYFPSNPFSTRVPLY-PTIGNIRNPQGGQSPYGPTYQSTNYTY-PYNYSGNQHNNYYNP 491
P Y PS+P + P Y P+ + SP P+Y T+ +Y P + S + + Y+P
Sbjct: 1556 PSYSPSSPGYSTSPAYMPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSATSPSYSP 1615
Query: 492 AQ---GPHNPLYKPGNGNLGVFNSSNYDNRPNNAGFYP-KPPYSGTY-NYN-TSLNHSP- 650
P +P Y P + + ++ ++ P + + P P YS T +Y+ TS ++SP
Sbjct: 1616 TSPSYSPTSPSYSPTSPS---YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1672
Query: 651 RPYYSNSTNRPHSIHPNY-PT-PNYNPS 728
P YS ++ P+Y PT P+Y+P+
Sbjct: 1673 SPSYSPTSPSYSPTSPSYSPTSPSYSPT 1700
>SPAC6B12.04c |||aminotransferase class I and II|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 421
Score = 34.7 bits (76), Expect = 0.015
Identities = 15/51 (29%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = -2
Query: 483 NSYYVDFQNNYKDKYNLLIDMSDHKVIDLLV-DSLYYQSSDREELELKKDY 334
++YY +++++YK ++ +L D I + D YY ++ +L+L KDY
Sbjct: 300 HNYYEEYKSSYKKRFEILAKAFDQLEIPYTIPDGSYYTMANFSKLKLPKDY 350
>SPCC1223.13 |cbf12||CBF1/Su|Schizosaccharomyces pombe|chr
3|||Manual
Length = 963
Score = 33.9 bits (74), Expect = 0.026
Identities = 35/154 (22%), Positives = 57/154 (37%), Gaps = 7/154 (4%)
Frame = +3
Query: 330 PSNPFSTRVPLYPTIGNIRNPQGGQSPYGPTYQSTNYTYPYNYSGNQHNNYYNPAQGPHN 509
P Y T NP PY P NY+ ++S N Y+
Sbjct: 111 PQEDSQDNTQTYSTPYTTMNPSNEMHPYPPATFENNYSVLPDHSSQP--NAYSFTGSNIL 168
Query: 510 PLYKPGNGNLGVFNSSNYDN-RPNNAGFYPKPPYSGTYNYNTSLNHSPRPYYSN-STNRP 683
P P + +Y N + N + P +S ++ + L H P P + + + P
Sbjct: 169 PTQSPSLNQM-----QDYQNLQQNGSSNTTIPSFSSQHDLSQGLTHQPVPNHDEYAFSYP 223
Query: 684 HSIH-----PNYPTPNYNPSWSTNKXNITNYNYP 770
+ + P +P P++ P+ S K N+ N N P
Sbjct: 224 YELQRKPLIPAHPVPSFRPT-SALKVNM-NSNVP 255
Score = 25.8 bits (54), Expect = 6.9
Identities = 19/84 (22%), Positives = 32/84 (38%)
Frame = +3
Query: 405 SPYGPTYQSTNYTYPYNYSGNQHNNYYNPAQGPHNPLYKPGNGNLGVFNSSNYDNRPNNA 584
S P Y N + N G + NP+ + N +++ P+N
Sbjct: 78 SSVSPYYSEKNESQALNADGTA---FANPSFHSFGLPQEDSQDNTQTYSTPYTTMNPSNE 134
Query: 585 GFYPKPPYSGTYNYNTSLNHSPRP 656
+P PP + NY+ +HS +P
Sbjct: 135 -MHPYPPATFENNYSVLPDHSSQP 157
>SPCC1235.05c |fft2||fun thirty related protein
Fft2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1284
Score = 33.1 bits (72), Expect = 0.045
Identities = 26/123 (21%), Positives = 48/123 (39%)
Frame = +3
Query: 402 QSPYGPTYQSTNYTYPYNYSGNQHNNYYNPAQGPHNPLYKPGNGNLGVFNSSNYDNRPNN 581
++P Y S+ P +Y Q +Y P + +Y N G +++ + + N
Sbjct: 20 ENPQSEVYGSSQTGLPSSYGNPQ--SYGTPPVQQSSAMYGVNNSMGGGMYNTSENTQFMN 77
Query: 582 AGFYPKPPYSGTYNYNTSLNHSPRPYYSNSTNRPHSIHPNYPTPNYNPSWSTNKXNITNY 761
+ Y+ T N +P +N+ + + P P+YNP S N ++ N
Sbjct: 78 TDYSQTSSYASTPMSNAYSRDAPAAI-NNNFGYSYVGQSSQPVPSYNPLPSYNTASLPNA 136
Query: 762 NYP 770
P
Sbjct: 137 GIP 139
>SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1517
Score = 31.1 bits (67), Expect = 0.18
Identities = 24/70 (34%), Positives = 28/70 (40%), Gaps = 6/70 (8%)
Frame = +3
Query: 453 NYSGNQHNNYYNPAQG--PHNPLYKPGNGNLGVFNSSNYDNRPN----NAGFYPKPPYSG 614
N GN NYY P QG P N N N S + R N + YP Y+G
Sbjct: 6 NQPGNFGQNYYKPVQGSIPANSEATNFQQNNSRENKSECELRQNSIAASMSAYPNGMYAG 65
Query: 615 TYNYNTSLNH 644
N+N NH
Sbjct: 66 AENHNVE-NH 74
>SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase
Snf22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1680
Score = 30.3 bits (65), Expect = 0.32
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 9/80 (11%)
Frame = +3
Query: 492 AQGPHNPLYKPGNGNLGVFNSS--NYDNRPN--NAGF-----YPKPPYSGTYNYNTSLNH 644
+ GP P PGNGN+G+ N S N PN NA P P + NT+ N
Sbjct: 109 SNGPTPP--NPGNGNVGLNNPSYMNSQASPNIMNAPLQRDTSVPPAPSMVHPHTNTNANS 166
Query: 645 SPRPYYSNSTNRPHSIHPNY 704
+ Y+N ++ ++ +P Y
Sbjct: 167 NNLKVYANQLSQQNTSNPTY 186
>SPAC22G7.10 |||mRNA cleavage and polyadenylation specificity factor
complex subunit, Fip1 homolog |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 344
Score = 30.3 bits (65), Expect = 0.32
Identities = 23/79 (29%), Positives = 31/79 (39%), Gaps = 2/79 (2%)
Frame = +3
Query: 534 NLGVFNSSNYDN-RPNNAGFYPKPPYSGTY-NYNTSLNHSPRPYYSNSTNRPHSIHPNYP 707
N V SSNY+ + G + Y N N S + +NS N S +
Sbjct: 222 NFPVHASSNYNTTHTSGGGVHSGAATPNAYVNNNPSSSRRESESPANSPNITSSAGMTHA 281
Query: 708 TPNYNPSWSTNKXNITNYN 764
P +NP+ S TNYN
Sbjct: 282 QPTHNPTSSYGNGASTNYN 300
Score = 25.8 bits (54), Expect = 6.9
Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +3
Query: 492 AQGPHNPLYKPGNGNLGVFNSSNYDNRPNNAGFYPKPPYSGTYNYNTSLNHSPRP-YYSN 668
AQ HNP GNG +N+S P+N P+S NY +S P P YSN
Sbjct: 281 AQPTHNPTSSYGNGASTNYNAS---RPPSN------HPHSS--NYPSSSRRKPSPDRYSN 329
Query: 669 STNR 680
++R
Sbjct: 330 YSSR 333
>SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 963
Score = 29.9 bits (64), Expect = 0.42
Identities = 35/153 (22%), Positives = 54/153 (35%), Gaps = 18/153 (11%)
Frame = +3
Query: 366 PTIGNIRNPQGGQSPYGP--TYQSTNYTYPYNYSGNQHNNYY---NPAQGPHNPL-YKPG 527
P NP +S P +Q +++ Y+ N Y +PA +P+ Y
Sbjct: 622 PYSSRFMNPVENRSANSPFDNFQHIDHSTELGYASNTSQQYQQTSHPAYTTMSPIEYGQA 681
Query: 528 NGNLGVFNSSN-YDNRPNNAGFYPKPP--YSGTYNYNTSLNHS---------PRPYYSNS 671
+N N Y N AG P +S +N S N + P P S
Sbjct: 682 APAAHYYNERNQYSQYDNVAGSASNTPDVHSVMHNKVASSNATSLPAAGTATPSPVVSQQ 741
Query: 672 TNRPHSIHPNYPTPNYNPSWSTNKXNITNYNYP 770
+P++ P YP P + + T N + P
Sbjct: 742 QPQPYAFPPMYPIPYVSYGYGTMPYNNNKFGQP 774
>SPCC1840.04 |||caspase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 425
Score = 29.9 bits (64), Expect = 0.42
Identities = 38/117 (32%), Positives = 47/117 (40%), Gaps = 5/117 (4%)
Frame = +3
Query: 387 NP-QGGQSPYGPTYQSTNYTYPYNYSGNQHNN---YYNPAQGPHNPLYKPGNGNLGVFNS 554
NP GGQ P TY NY+ P N G+Q NN Y P + P +GN
Sbjct: 6 NPYNGGQYPPYNTYTRPNYS-PNN--GSQSNNTVHQYQPPRMPPPSTRPQTDGNSNQIPM 62
Query: 555 SNYDN-RPNNAGFYPKPPYSGTYNYNTSLNHSPRPYYSNSTNRPHSIHPNYPTPNYN 722
N + ++A + P SG NT N P YS P PN T +YN
Sbjct: 63 ENVGHISLSSANSHAYAPPSGP-PPNTGANSYGNPNYSG----PQL--PNTQTQSYN 112
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 29.5 bits (63), Expect = 0.56
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 330 PSNPFSTRVPLYPTIGNIRNPQGGQSPYGPTYQSTNYTY 446
P +P S+ VP+YPT PQ +P P+Y S ++
Sbjct: 311 PVSPSSSFVPMYPTTFPSSKPQIVNAPPAPSYFSPGSSF 349
>SPAC12G12.07c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 412
Score = 29.5 bits (63), Expect = 0.56
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +3
Query: 606 YSGTYNYNTSLNHSPRPYYSNSTNRPHSIHPNYPTPNYNP 725
Y G N S R YSNS N PN N+NP
Sbjct: 371 YRGGRGRGGFFNRSKRGQYSNSNNSTSQPSPNAELSNFNP 410
>SPAC29B12.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 682
Score = 29.1 bits (62), Expect = 0.74
Identities = 33/141 (23%), Positives = 52/141 (36%), Gaps = 8/141 (5%)
Frame = +3
Query: 360 LYPTIGNIRNPQGGQSPYGPTYQSTNYTYPYNY--SGNQHNNYYNPAQGPHNPLYKPGNG 533
LYP I RN G + + + QS + N N H N P+
Sbjct: 261 LYPFIYQSRNVPMGSTMFASSNQSAAHPDGNNALPMDNTHANISYMQSSQSMPVNSYSYD 320
Query: 534 NLGVFNSSNYDNRPNN--AGFYPKPPYSGTYNYNTSLNHSPRPYYSNSTNR--PHSIHPN 701
S +++P N + + P T + +++ P N PHS H +
Sbjct: 321 RYTPNQPSYLESKPGNHQPSYTSEQPMYSTASVPQQISNGPTAVNGLPMNSYTPHSNHLH 380
Query: 702 YPTPNYN--PSWSTNKXNITN 758
P+PN N P+ S + N T+
Sbjct: 381 SPSPNSNSGPTDSLSAPNSTS 401
>SPBC902.06 |mto2||MT organizer Mto2|Schizosaccharomyces pombe|chr
2|||Manual
Length = 397
Score = 28.7 bits (61), Expect = 0.97
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 621 NYNTSLNHSPRPYYSNSTNRPHSIHPNYPTPN 716
NY +S++ SP+ S+S RP S+H N P P+
Sbjct: 268 NYTSSVDSSPQRMASDSYGRP-SLHLNDPFPS 298
>SPCC320.07c |mde7||RNA-binding protein Mde7|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 761
Score = 28.7 bits (61), Expect = 0.97
Identities = 20/92 (21%), Positives = 33/92 (35%)
Frame = +3
Query: 483 YNPAQGPHNPLYKPGNGNLGVFNSSNYDNRPNNAGFYPKPPYSGTYNYNTSLNHSPRPYY 662
+NP + P ++G + SN++NR P Y++ T N +
Sbjct: 364 FNPIKAPKAEYLNQSRASMGNPSPSNWNNRL----LQPSSKEQAVYSFQTQKNSKGLQFT 419
Query: 663 SNSTNRPHSIHPNYPTPNYNPSWSTNKXNITN 758
SN P + + P N S + N N
Sbjct: 420 SNELTNPTAKYSQLPNNIANIGESNSLSNQPN 451
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 28.3 bits (60), Expect = 1.3
Identities = 16/64 (25%), Positives = 25/64 (39%), Gaps = 3/64 (4%)
Frame = +3
Query: 411 YGPTYQSTNYTYPYNYSGNQ---HNNYYNPAQGPHNPLYKPGNGNLGVFNSSNYDNRPNN 581
Y P Y YN +G + Y PA NP+ N ++ S+Y+ +
Sbjct: 1327 YDPMQMQQQTPYGYNQTGMEGYSEYGYAQPAGNMANPMSYDPVSNASLYMPSDYNQQTQP 1386
Query: 582 AGFY 593
A +Y
Sbjct: 1387 ANYY 1390
>SPACUNK4.14 |mdb1||BRCT domain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 520
Score = 28.3 bits (60), Expect = 1.3
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = -2
Query: 492 LDYNSYYVDFQNNYKDKYNLLIDMSDHKVIDLLVDSLYYQSSDREELELKKD-Y*ENIP 319
++ N +D+ +N + YN LI +VI L S + +S++ LEL+K+ + E IP
Sbjct: 23 INANEDQIDYSSNLEQNYNSLIRQGSDQVIPL---SRF--ASEKSALELEKELFSERIP 76
>SPAC644.16 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 422
Score = 28.3 bits (60), Expect = 1.3
Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +3
Query: 573 PNNAGFYPKPPYSGTYNYNTSLNHSPRPYYSNSTNRPHSI-HPNYPTPNY 719
P+ G+YP+ + +Y Y + P P ++ P S +P+YP Y
Sbjct: 95 PSRYGYYPQSYANQSYTYGNNFGSYP-PTQPSTQPLPQSYGYPSYPPAGY 143
>SPBC1D7.03 |mug80||cyclin Clg1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 461
Score = 28.3 bits (60), Expect = 1.3
Identities = 20/86 (23%), Positives = 35/86 (40%)
Frame = +3
Query: 252 SSRHYHRSTAGDAPKRTVRQALPGYFPSNPFSTRVPLYPTIGNIRNPQGGQSPYGPTYQS 431
SS H+ + + ++Q P +PS P + P Y ++ + P Q Y P
Sbjct: 79 SSSHHPSAVPSLLSQHRLQQPQPRLYPSAPLNYYWPSYQSVPSAAPPPPSQQRYMP---- 134
Query: 432 TNYTYPYNYSGNQHNNYYNPAQGPHN 509
+ YN + +Q N N + +N
Sbjct: 135 -DSAVAYNPNQDQFGNSVNVSAACNN 159
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 27.9 bits (59), Expect = 1.7
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +3
Query: 594 PKPPYSGTYNYNTSLNHSPRPYYSNSTNRPHSIHPNYPT 710
P P + S N+SP Y +N TN + P+YPT
Sbjct: 376 PAPTFDRRNVSRNSNNNSPEGYDNNRTNPTVNNLPSYPT 414
>SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|chr
3|||Manual
Length = 867
Score = 27.5 bits (58), Expect = 2.2
Identities = 35/128 (27%), Positives = 52/128 (40%), Gaps = 11/128 (8%)
Frame = +3
Query: 366 PTIGNIRNPQGGQSPY-GPTYQSTNYTYPYNYSGNQHN----------NYYNPAQGPHNP 512
PT + +PQ PY GP ST T +Y N N N+ +P + P+NP
Sbjct: 266 PTFFSSPSPQ----PYSGPILASTAPTLDGSYLSNPSNSNPAVMSLSSNFPSPPK-PNNP 320
Query: 513 LYKPGNGNLGVFNSSNYDNRPNNAGFYPKPPYSGTYNYNTSLNHSPRPYYSNSTNRPHSI 692
+Y P GN V N + P+ F + N +LN S + P +
Sbjct: 321 VYLPPRGNPTV-NDRVSNVLPSITSF-DSSVTTVPSNSPATLNSYTTSVPSGMSRHPMLM 378
Query: 693 HPNYPTPN 716
+P+ P P+
Sbjct: 379 NPSTPEPS 386
>SPAC17A5.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 224
Score = 27.5 bits (58), Expect = 2.2
Identities = 17/59 (28%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +3
Query: 330 PSNPFSTRVPLYPTIGNIRNPQGGQSPYGPTYQSTNYTYPYNYSGNQ-HNNYYNPAQGP 503
PS+ ++T P Y T PQ +P +Y YP Y + HN Y + P
Sbjct: 99 PSSNYNTAKPPYQTSQFYARPQSSYAPPPSGRPRISYPYPPGYMCYKCHNTGYKDSGRP 157
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 27.5 bits (58), Expect = 2.2
Identities = 35/158 (22%), Positives = 59/158 (37%), Gaps = 15/158 (9%)
Frame = +3
Query: 342 FSTRVPLYPTIGNIRNPQGGQSPYGPTYQSTNYTYPYNYSGNQHNNYYN---PAQGP--- 503
FS V P +R G P+G N T N + ++Y+ + GP
Sbjct: 1559 FSKFVAGDPNFDVMRPATVGPGPFGKVASQKNLTVQTNTNNAAMESFYSDRPTSSGPSYQ 1618
Query: 504 -HNPLYKPGNGNLGVF-----NSSNYDNRPNNAGFYPKPPYSGTYNYNTSLNHSPRPYYS 665
PL + N+GV+ ++ +N + YP P S Y HS S
Sbjct: 1619 NRTPLTGQESMNMGVYSPYRRSTEIAENMSMDGNAYPYTPASQENPYTP--RHSQEDNAS 1676
Query: 666 NSTNRPHSIHPNYPTPNYNPSWSTNKXNI---TNYNYP 770
+ +P + + N +Y P ++ + + T +N P
Sbjct: 1677 VLSQQPLTFYSNVADNSYMPVSASQEPKMGMGTAFNMP 1714
>SPBC2F12.09c |atf21||transcription factor Atf21|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 355
Score = 27.5 bits (58), Expect = 2.2
Identities = 31/147 (21%), Positives = 58/147 (39%), Gaps = 8/147 (5%)
Frame = +3
Query: 345 STRVPLYPTIGNIRNPQGGQSPYGPTYQSTNYTYPYNYSGNQHNNYYNPAQGPHNPLYKP 524
S+ + +Y G ++ P+ Q+ + P+ NY + G+ +Y + + P
Sbjct: 52 SSDIGVYECRGPVQGPKD-QTSF-PSNSHNNYA---SIVGDASIGHYLKGPERTSEVSLP 106
Query: 525 GNGNLGVFNSSNYDNRPNN-----AGFYPKPPYS--GTYN-YNTSLNHSPRPYYSNSTNR 680
NL +++N +P N + YS T N YN + P + N TN
Sbjct: 107 QTVNLSEISNNNDKGQPTNTPPVRSTIVAPSLYSEGSTLNHYNNGSHQVLHPQFQNGTNA 166
Query: 681 PHSIHPNYPTPNYNPSWSTNKXNITNY 761
P+ + N N N + + + + Y
Sbjct: 167 PYVVQSNLMQNNVNLTGAEQEKGLDLY 193
>SPAPB24D3.10c |agl1|agl|alpha-glucosidase Agl1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 969
Score = 27.5 bits (58), Expect = 2.2
Identities = 26/122 (21%), Positives = 44/122 (36%), Gaps = 5/122 (4%)
Frame = +3
Query: 411 YGPTYQSTNYTYPYNYSGNQHNNYYNPAQGPHNPLYKPGNGNLGVFNSSNYDNRPNNAGF 590
Y P+Y +TN Y ++Y+ N ++ + L+ G VF + N
Sbjct: 134 YSPSYNNTNLLYNFSYNANPF-EFWVTRKSDGEVLFDT-RGQKLVFEDQYIELTTNMVEN 191
Query: 591 YPKPPYSGTYNYNTSLNHSPRPYYSNSTNRP-----HSIHPNYPTPNYNPSWSTNKXNIT 755
Y + T + N+ R +++N P + HP Y Y + N T
Sbjct: 192 YNLYGLAETIHGLRLGNNLTRTFWANDEPSPVDQNMYGSHPYYLEQRYKADGINSTLNET 251
Query: 756 NY 761
Y
Sbjct: 252 TY 253
>SPAC29B12.03 |spd1||ribonucleotide reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 124
Score = 27.1 bits (57), Expect = 3.0
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = +3
Query: 552 SSNYDNRPNNAGFYPKPPYSGTYNYNTSLNHSPRPYYSNSTNRP-HSIHPNYPTPN 716
S+ Y ++ Y PP T + N +L ++ Y N T RP PNY N
Sbjct: 45 STGYKSKQTTFPAY-NPPLYNTVSENIALKNTAFSYEPNGTKRPFEQAIPNYNWAN 99
>SPAPB1A10.09 |ase1||microtubule-associated protein Ase1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 731
Score = 26.6 bits (56), Expect = 3.9
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +3
Query: 603 PYSGTYNYNTSLNHSPRPYYSNSTNRPHSIHPNYP-TPNYNPSWSTNK 743
P SG N NT N P N+ S HPNY TP+ S +++K
Sbjct: 590 PVSG--NSNTPFNKFPNSVSRNTHFESKSPHPNYSRTPHETYSKASSK 635
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 26.6 bits (56), Expect = 3.9
Identities = 16/60 (26%), Positives = 23/60 (38%), Gaps = 2/60 (3%)
Frame = +3
Query: 318 PGYFPSNPFSTRVPLYPTIG--NIRNPQGGQSPYGPTYQSTNYTYPYNYSGNQHNNYYNP 491
P PSNP++ T+ + P GG P Q N P + +Q + Y P
Sbjct: 976 PNMPPSNPYTPIAVASSTVNPAHTYKPHGGSQIVPPPKQPANRVVPLPPTASQRASAYEP 1035
>SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 743
Score = 26.2 bits (55), Expect = 5.2
Identities = 22/84 (26%), Positives = 32/84 (38%)
Frame = +3
Query: 243 NDFSSRHYHRSTAGDAPKRTVRQALPGYFPSNPFSTRVPLYPTIGNIRNPQGGQSPYGPT 422
N S+R+ H G P T+ Q P P+ G Q Q + +
Sbjct: 374 NFASNRNPHLKQGGAVPSSTLPQQQKSLDKPKPAQQ-----PSTGQFSGNQMNQYGFSNS 428
Query: 423 YQSTNYTYPYNYSGNQHNNYYNPA 494
S N Y N++GN + + NPA
Sbjct: 429 PYSQNMLY--NFNGNANPSRLNPA 450
>SPBC354.05c |sre2||membrane-tethered transcription factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 793
Score = 26.2 bits (55), Expect = 5.2
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 666 NSTNRPHSIHPNYPTPNYNPSWSTNKXNITNYNY 767
N + PHS++PN+P P+ + + N NY
Sbjct: 243 NPSISPHSLNPNFPQYTEKPALTLLQSPKQNSNY 276
>SPAC25A8.01c ||snf2SR|fun thirty related protein
Fft3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 922
Score = 26.2 bits (55), Expect = 5.2
Identities = 13/45 (28%), Positives = 20/45 (44%)
Frame = +3
Query: 420 TYQSTNYTYPYNYSGNQHNNYYNPAQGPHNPLYKPGNGNLGVFNS 554
T + + PYNYSG+ N P+ G + N V+N+
Sbjct: 87 TSSANSINQPYNYSGSLENLVPTPSAGTPSQFMDAQNPYGAVYNA 131
>SPBC577.13 |syj2||inositol-polyphosphate 5-phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 889
Score = 26.2 bits (55), Expect = 5.2
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = +3
Query: 330 PSNPFSTRVPLYPTIGNIRNPQGGQSPYGPTYQSTNYTYPYN 455
PS+ FST + NI S Y Y ST YPY+
Sbjct: 128 PSSTFSTSTS---DLNNIEKDNLVNSEYSSKYSSTTRIYPYH 166
>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1628
Score = 26.2 bits (55), Expect = 5.2
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +3
Query: 609 SGTYNYNTSLNHSPRPYYSNSTN--RPHSIHPNYPTPNYN 722
S + N ++N +PR +NSTN R S N+ T N N
Sbjct: 1470 SDRWRQNGNVNRNPRVSNNNSTNVSRERSSEANHRTSNDN 1509
>SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein
4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 636
Score = 26.2 bits (55), Expect = 5.2
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 10/68 (14%)
Frame = +3
Query: 597 KPPYSGTYNYNTSL---NHSPRPYYSNSTNRPHSIHPN-------YPTPNYNPSWSTNKX 746
KP S N T++ +++P + S+++N+P ++ PN P+ + PS S ++
Sbjct: 94 KPVVSSKPNQTTAMPPPSNNPSRHVSSTSNKPAAVSPNPAAHHAELPSGSVPPSASVSRA 153
Query: 747 NITNYNYP 770
N T P
Sbjct: 154 NSTATTTP 161
>SPBC12D12.01 |sad1|SPBC16H5.01c|spindle pole body protein
Sad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 514
Score = 26.2 bits (55), Expect = 5.2
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +3
Query: 633 SLNHSPRPYYSNSTNRPHSIHPNYPTPNYNPSWSTNKXNI 752
+L H + +YS S + +S N P PN P+ + K ++
Sbjct: 186 TLLHKGQEFYSRSFSSDNSQPSNSPVPNIPPASNDTKTSL 225
>SPAC5D6.12 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 314
Score = 25.8 bits (54), Expect = 6.9
Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 4/114 (3%)
Frame = +3
Query: 183 TVLVLMTKLLKSSTFKDEVANDFSSRHYHRSTA-GDAPKRTVRQALPGY-FPSNPFSTRV 356
++L L + L ST A +S HY ++ D+P + G+ NP +
Sbjct: 19 SLLSLYKRRLHKSTSHSSTA---TSSHYSKNNLPSDSPDLLFDYFIDGHKIHVNPNAVE- 74
Query: 357 PLYPTIGNIRNPQGGQSPYGPTYQSTNYTYPYNYSGNQHN--NYYNPAQGPHNP 512
PL+ + + G P+G NY Y S N N Y+P+ P +P
Sbjct: 75 PLH--LRRNADVVGFSLPHGVKQSFENYIQKYPLSDQVENSSNIYDPSSPPDSP 126
>SPBC685.03 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 452
Score = 25.8 bits (54), Expect = 6.9
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +3
Query: 621 NYNTSLNHSPRPYYSNSTNRPHSIHPNYPTPNYNPSWSTNKXNITN 758
NY S ++S S + S++P T N + SW+++ TN
Sbjct: 128 NYTQSSSNSTSTMNSTGSVSGGSVYPTNSTTNSSISWNSSTSAATN 173
>SPAC22E12.11c |set3||histone lysine methyltransferase
Set3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 859
Score = 25.8 bits (54), Expect = 6.9
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +3
Query: 588 FYPKPPYSGTYNYNTSLNHSPRPYYSNSTNRPHSIHPNY 704
F+ KP Y+ + S+ P + + +RPH +HP++
Sbjct: 626 FHGKPDYN---KRSLSIERKPEAFKTKG-DRPHKVHPSF 660
>SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 676
Score = 25.4 bits (53), Expect = 9.1
Identities = 14/52 (26%), Positives = 20/52 (38%)
Frame = +3
Query: 570 RPNNAGFYPKPPYSGTYNYNTSLNHSPRPYYSNSTNRPHSIHPNYPTPNYNP 725
R N+ P P T N + + + NS N P + + N T NP
Sbjct: 392 RVQNSNMPPPAPRPVTNNSSNNNTNQSNASNENSPNAPSAANDNTETTTVNP 443
>SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 984
Score = 25.4 bits (53), Expect = 9.1
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +3
Query: 420 TYQSTNYTYPYNYSGNQHNNYYNPAQGPHNPLYKPGNGNLGVFNSSNYDNR 572
T+ T Y Y+G++ + ++ NP+ G GN G S +Y R
Sbjct: 264 TWNDKTLTNTYTYTGHRGKHIWSLVVSSANPIIYTG-GNDGSVRSWDYKTR 313
>SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1151
Score = 25.4 bits (53), Expect = 9.1
Identities = 21/77 (27%), Positives = 31/77 (40%), Gaps = 2/77 (2%)
Frame = +3
Query: 519 KPGNGNLGVFNSSNYDNRPNNAGFYPK--PPYSGTYNYNTSLNHSPRPYYSNSTNRPHSI 692
K GNG+ + N+D P+ P PP SL+H+ P SNS + +
Sbjct: 54 KAGNGDAEMREFFNFDGLPDQGLNLPSIAPP---------SLSHASSPNLSNSQDEAECL 104
Query: 693 HPNYPTPNYNPSWSTNK 743
+ NPS N+
Sbjct: 105 PSDRQQDYINPSLHLNR 121
>SPCC736.12c |||conserved protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 437
Score = 25.4 bits (53), Expect = 9.1
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +3
Query: 618 YNYNTSLNHSPRPYYSNSTNRPHSIHPNYPTPNYNPSWS 734
Y+ + S S PY S ST+ PH H + Y S S
Sbjct: 125 YHTSGSYPESQPPYSSYSTDAPHYYHAGSESSAYYDSRS 163
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,042,405
Number of Sequences: 5004
Number of extensions: 69795
Number of successful extensions: 311
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 306
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 371330890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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