Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22d02
         (740 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8ZPP4 Cluster: Secretion system apparatus protein; n=7...    39   0.11 
UniRef50_Q0E2I3 Cluster: Os02g0236500 protein; n=5; Oryza sativa...    38   0.34 
UniRef50_O82621 Cluster: T9A4.11 protein; n=1; Arabidopsis thali...    38   0.34 
UniRef50_UPI00015B596F Cluster: PREDICTED: similar to ENSANGP000...    37   0.45 
UniRef50_Q4UNA7 Cluster: 50S ribosomal protein L19; n=58; Bacter...    37   0.45 
UniRef50_Q1ZY18 Cluster: Genscan protein 55; n=1; Beta vulgaris|...    36   1.4  
UniRef50_UPI00015B491C Cluster: PREDICTED: similar to ENSANGP000...    34   3.2  
UniRef50_A6DAQ8 Cluster: Exbb\tolq family transport protein; n=1...    34   3.2  

>UniRef50_Q8ZPP4 Cluster: Secretion system apparatus protein; n=7;
           Salmonella|Rep: Secretion system apparatus protein -
           Salmonella typhimurium
          Length = 403

 Score = 39.1 bits (87), Expect = 0.11
 Identities = 20/50 (40%), Positives = 30/50 (60%)
 Frame = +2

Query: 305 ISSFCPSTSSFCELITASLESVSVSPDPGTYCDDILPEEVRDI*IRKGRP 454
           +S +C S+S   + + A+LES  V    G  CDD+L  EV+D+ I+ G P
Sbjct: 175 LSGYC-SSSEQMQKVRATLESWGVMYRDGVICDDLLVREVQDVLIKMGYP 223


>UniRef50_Q0E2I3 Cluster: Os02g0236500 protein; n=5; Oryza
           sativa|Rep: Os02g0236500 protein - Oryza sativa subsp.
           japonica (Rice)
          Length = 1084

 Score = 37.5 bits (83), Expect = 0.34
 Identities = 27/69 (39%), Positives = 38/69 (55%)
 Frame = +2

Query: 383 DPGTYCDDILPEEVRDI*IRKGRPVELLRNFYKFSRFKCITKTRYLTKNIFIRKLTNGES 562
           DP T+  + L    RDI I KG P+   R F     F   +  R+ +   + RKL+NGE 
Sbjct: 144 DPRTW--ENLDNRGRDILIEKG-PI---REFNLL--FPSDSSGRHFSYAYYSRKLSNGEV 195

Query: 563 LERKWLLYS 589
           ++RKWL+YS
Sbjct: 196 IDRKWLVYS 204



 Score = 35.5 bits (78), Expect = 1.4
 Identities = 12/27 (44%), Positives = 20/27 (74%)
 Frame = +3

Query: 654 NLSSPNGCKDWKHINNLFIEHENSLQH 734
           +L + +G KDWKH++    +HENS++H
Sbjct: 225 SLLASDGLKDWKHLSGRLKQHENSVEH 251


>UniRef50_O82621 Cluster: T9A4.11 protein; n=1; Arabidopsis
           thaliana|Rep: T9A4.11 protein - Arabidopsis thaliana
           (Mouse-ear cress)
          Length = 336

 Score = 37.5 bits (83), Expect = 0.34
 Identities = 20/66 (30%), Positives = 34/66 (51%)
 Frame = +2

Query: 410 LPEEVRDI*IRKGRPVELLRNFYKFSRFKCITKTRYLTKNIFIRKLTNGESLERKWLLYS 589
           +  E+RD  + KG P++ +   Y F +   I   R+ +   + R++ NG+  +R WLLYS
Sbjct: 71  IDRELRDFLVEKG-PMKRVHEKYAFPKTAGIR--RHFSHRYYKREMKNGDKQDRNWLLYS 127

Query: 590 PAKKSV 607
                V
Sbjct: 128 KVSDKV 133


>UniRef50_UPI00015B596F Cluster: PREDICTED: similar to
           ENSANGP00000024626; n=3; Nasonia vitripennis|Rep:
           PREDICTED: similar to ENSANGP00000024626 - Nasonia
           vitripennis
          Length = 813

 Score = 37.1 bits (82), Expect = 0.45
 Identities = 16/30 (53%), Positives = 21/30 (70%)
 Frame = +2

Query: 506 KTRYLTKNIFIRKLTNGESLERKWLLYSPA 595
           K R L K++F  KL N E +ER+WL YSP+
Sbjct: 146 KVRTLNKSLFQLKLQNNEIVEREWLSYSPS 175


>UniRef50_Q4UNA7 Cluster: 50S ribosomal protein L19; n=58;
           Bacteria|Rep: 50S ribosomal protein L19 - Rickettsia
           felis (Rickettsia azadi)
          Length = 138

 Score = 37.1 bits (82), Expect = 0.45
 Identities = 16/57 (28%), Positives = 30/57 (52%)
 Frame = +2

Query: 437 IRKGRPVELLRNFYKFSRFKCITKTRYLTKNIFIRKLTNGESLERKWLLYSPAKKSV 607
           I K    +L   F  +       + R +T +  +RK+++GE +ER+++ YSP   S+
Sbjct: 41  IEKDGKEKLTERFQAYEGVVIAKRNRGITSSFLVRKISHGEGVERRFMTYSPIVHSI 97


>UniRef50_Q1ZY18 Cluster: Genscan protein 55; n=1; Beta
           vulgaris|Rep: Genscan protein 55 - Beta vulgaris (Sugar
           beet)
          Length = 241

 Score = 35.5 bits (78), Expect = 1.4
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = +3

Query: 630 NTTTGTEYNLSS--PNGCKDWKHINNLFIEHENSLQH 734
           N T G +   SS   +G  DWKH++    EHENS+ H
Sbjct: 48  NLTMGKQNKTSSLATDGLSDWKHLSERLKEHENSVDH 84


>UniRef50_UPI00015B491C Cluster: PREDICTED: similar to
           ENSANGP00000024626, partial; n=4; Nasonia
           vitripennis|Rep: PREDICTED: similar to
           ENSANGP00000024626, partial - Nasonia vitripennis
          Length = 1023

 Score = 34.3 bits (75), Expect = 3.2
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = +2

Query: 512 RYLTKNIFIRKLTNGESLERKWLLYS 589
           ++     F R L NGE  ERKWLLYS
Sbjct: 107 KFFNPKHFTRALNNGEKCERKWLLYS 132


>UniRef50_A6DAQ8 Cluster: Exbb\tolq family transport protein; n=1;
           Caminibacter mediatlanticus TB-2|Rep: Exbb\tolq family
           transport protein - Caminibacter mediatlanticus TB-2
          Length = 182

 Score = 34.3 bits (75), Expect = 3.2
 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
 Frame = +3

Query: 39  LIFSFKLFHYVEKNIFKWFTKKEKIIAQKEIMEKLPKLTSSFT-VEETNKPRDY 197
           L F F +F Y   ++F W  K+E+ +    I E  P  +S ++ +E+ NKP  Y
Sbjct: 25  LFFVFFVFFYKYISLFIWIKKEEEALNSLLISELFPMNSSLYSCLEKANKPNKY 78


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 620,233,291
Number of Sequences: 1657284
Number of extensions: 11514650
Number of successful extensions: 28781
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 27821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28773
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60500186565
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)