Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22d02
         (740 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT009966-1|AAQ22435.1| 1091|Drosophila melanogaster RE68041p pro...    29   8.8  
AF198084-1|AAF04860.1| 1081|Drosophila melanogaster semaphorin 5...    29   8.8  
AE014296-2088|AAF49966.3| 1093|Drosophila melanogaster CG5661-PA...    29   8.8  

>BT009966-1|AAQ22435.1| 1091|Drosophila melanogaster RE68041p protein.
          Length = 1091

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +3

Query: 573  NGSFIHQQRNPYLIATVYINTTTGTEYNLSSPNGCK 680
            N + +HQ   P ++A  YI+  +GT    S+ N C+
Sbjct: 1048 NRNNMHQNNTPKVLAKTYIDCESGTIKRQSALNNCR 1083


>AF198084-1|AAF04860.1| 1081|Drosophila melanogaster semaphorin 5C
            protein.
          Length = 1081

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +3

Query: 573  NGSFIHQQRNPYLIATVYINTTTGTEYNLSSPNGCK 680
            N + +HQ   P ++A  YI+  +GT    S+ N C+
Sbjct: 1038 NRNNMHQNNTPKVLAKTYIDCESGTIKRQSALNNCR 1073


>AE014296-2088|AAF49966.3| 1093|Drosophila melanogaster CG5661-PA
            protein.
          Length = 1093

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +3

Query: 573  NGSFIHQQRNPYLIATVYINTTTGTEYNLSSPNGCK 680
            N + +HQ   P ++A  YI+  +GT    S+ N C+
Sbjct: 1050 NRNNMHQNNTPKVLAKTYIDCESGTIKRQSALNNCR 1085


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,575,246
Number of Sequences: 53049
Number of extensions: 516855
Number of successful extensions: 1237
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1237
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3355404063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)