Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22d02
         (740 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical pr...    31   1.1  
Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical p...    31   1.1  
AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like...    31   1.1  
Z99278-1|CAB16490.1|  793|Caenorhabditis elegans Hypothetical pr...    29   3.5  
AF000263-17|AAG00013.1|  179|Caenorhabditis elegans Hypothetical...    29   3.5  
AC024799-9|AAK72312.1|  293|Caenorhabditis elegans Hypothetical ...    29   3.5  
U97592-5|AAB52873.1|  597|Caenorhabditis elegans Hypothetical pr...    28   8.0  
U41268-1|AAA82433.2|  234|Caenorhabditis elegans Temporarily ass...    28   8.0  

>Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical protein
            F15B9.7 protein.
          Length = 2577

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 6/47 (12%)
 Frame = -1

Query: 413  VKCRHSKYQGQET----QIHSLS--SQLLIHRSLKLMDRSWKLKFSI 291
            +KCRH KY G++T    ++ S+S   + L++ +L L    W +KF +
Sbjct: 1313 MKCRHCKYHGEDTDERCRLRSVSFDGEGLLNVNLDLPRTQWTMKFRV 1359


>Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical
            protein F15B9.7 protein.
          Length = 2577

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 6/47 (12%)
 Frame = -1

Query: 413  VKCRHSKYQGQET----QIHSLS--SQLLIHRSLKLMDRSWKLKFSI 291
            +KCRH KY G++T    ++ S+S   + L++ +L L    W +KF +
Sbjct: 1313 MKCRHCKYHGEDTDERCRLRSVSFDGEGLLNVNLDLPRTQWTMKFRV 1359


>AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like
            protein FMI-1 protein.
          Length = 2596

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 6/47 (12%)
 Frame = -1

Query: 413  VKCRHSKYQGQET----QIHSLS--SQLLIHRSLKLMDRSWKLKFSI 291
            +KCRH KY G++T    ++ S+S   + L++ +L L    W +KF +
Sbjct: 1313 MKCRHCKYHGEDTDERCRLRSVSFDGEGLLNVNLDLPRTQWTMKFRV 1359


>Z99278-1|CAB16490.1|  793|Caenorhabditis elegans Hypothetical
           protein Y53C12B.1 protein.
          Length = 793

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 13/24 (54%), Positives = 19/24 (79%)
 Frame = +3

Query: 99  KKEKIIAQKEIMEKLPKLTSSFTV 170
           K+ KI A+K+ +E+LPKLT S T+
Sbjct: 450 KEVKIDAEKDFVEQLPKLTCSSTM 473


>AF000263-17|AAG00013.1|  179|Caenorhabditis elegans Hypothetical
           protein T08B2.3 protein.
          Length = 179

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -3

Query: 333 LEVDGQKLEIKVQHLMCTYMSFSSHVTF 250
           LEV G K   + Q +MC Y+SF   + F
Sbjct: 23  LEVSGGKTRQRCQVVMCVYLSFPKFINF 50


>AC024799-9|AAK72312.1|  293|Caenorhabditis elegans Hypothetical
           protein Y49C4A.1 protein.
          Length = 293

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -2

Query: 730 CKLFSCSINKLFICFQSLH 674
           C+ F C+INK F  F S+H
Sbjct: 158 CRFFGCAINKCFFKFWSMH 176


>U97592-5|AAB52873.1|  597|Caenorhabditis elegans Hypothetical
           protein C14A11.6 protein.
          Length = 597

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
 Frame = +3

Query: 21  IR*TEILIFSFKLFHYVEKNIFKWFTKKEKIIAQ--KEIMEKLPKLTSSFT 167
           IR   +   SF+    + KNIF+  T +++I+AQ   E+ + L  LT+SFT
Sbjct: 394 IRKAAVAYLSFEDSVQILKNIFR--TMEDRIVAQAHNELEQMLDILTNSFT 442


>U41268-1|AAA82433.2|  234|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 81 protein.
          Length = 234

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 12/25 (48%), Positives = 20/25 (80%), Gaps = 2/25 (8%)
 Frame = +3

Query: 84  FKWFTKKEKIIAQKEIMEKL--PKL 152
           FK+F K+E+ I ++E++EK+  PKL
Sbjct: 115 FKYFRKRERDIIKEEVLEKMTSPKL 139


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,867,307
Number of Sequences: 27780
Number of extensions: 293203
Number of successful extensions: 841
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 808
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 841
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)