Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22c24
         (660 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0456 + 10489544-10491064,10491506-10491632,10491633-10492606     29   2.5  
07_01_0162 + 1138420-1138640,1138788-1138830,1139449-1140971,114...    28   7.6  

>02_02_0456 + 10489544-10491064,10491506-10491632,10491633-10492606
          Length = 873

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 9/17 (52%), Positives = 14/17 (82%)
 Frame = +2

Query: 350 SVDKLKSDVFWDFNRMC 400
           ++D LK D+FWDF ++C
Sbjct: 361 TLDGLKDDIFWDFFKLC 377


>07_01_0162 + 1138420-1138640,1138788-1138830,1139449-1140971,
            1141770-1142063,1142145-1142337,1142624-1142694,
            1142781-1144200
          Length = 1254

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 8/28 (28%), Positives = 19/28 (67%)
 Frame = +2

Query: 488  CEGRI*SLEQISIDGVTSYPERLVHIFL 571
            C G+  S + + + G T++PE+++ +F+
Sbjct: 1087 CHGQSRSSDMVELSGTTTFPEQVIKLFV 1114


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,319,114
Number of Sequences: 37544
Number of extensions: 334288
Number of successful extensions: 719
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 719
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1655832080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)