Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22c22
         (674 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49937-8|CAD44113.1|  546|Caenorhabditis elegans Hypothetical pr...    29   2.3  
Z49867-4|CAD44109.1|  546|Caenorhabditis elegans Hypothetical pr...    29   2.3  
AC024831-5|AAK72076.1|  186|Caenorhabditis elegans Hypothetical ...    29   2.3  
Z73896-8|CAA98061.1|  525|Caenorhabditis elegans Hypothetical pr...    29   3.0  
Z73422-12|CAJ76980.1|  525|Caenorhabditis elegans Hypothetical p...    29   3.0  
Z73422-11|CAA97768.1|  423|Caenorhabditis elegans Hypothetical p...    29   3.0  
Z73422-10|CAA97772.1|  525|Caenorhabditis elegans Hypothetical p...    29   3.0  
Z93397-3|CAB07720.2|  376|Caenorhabditis elegans Hypothetical pr...    29   4.0  
Z75527-1|CAA99774.1|  441|Caenorhabditis elegans Hypothetical pr...    29   4.0  
Z54218-2|CAA90956.1|  352|Caenorhabditis elegans Hypothetical pr...    29   4.0  

>Z49937-8|CAD44113.1|  546|Caenorhabditis elegans Hypothetical
           protein C33D3.5 protein.
          Length = 546

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = +3

Query: 54  KYIDNNCIMV*KCSSNLQYNYNEAVVFLNSPSSSTEPNPHKLNH 185
           KYID++ +M+  CS    Y+    VV +  PS +   N  K+N+
Sbjct: 443 KYIDSSGMMLLSCSLADFYHIEHVVVRIQKPSKTEFENYKKVNY 486


>Z49867-4|CAD44109.1|  546|Caenorhabditis elegans Hypothetical
           protein C33D3.5 protein.
          Length = 546

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = +3

Query: 54  KYIDNNCIMV*KCSSNLQYNYNEAVVFLNSPSSSTEPNPHKLNH 185
           KYID++ +M+  CS    Y+    VV +  PS +   N  K+N+
Sbjct: 443 KYIDSSGMMLLSCSLADFYHIEHVVVRIQKPSKTEFENYKKVNY 486


>AC024831-5|AAK72076.1|  186|Caenorhabditis elegans Hypothetical
           protein Y55F3C.5 protein.
          Length = 186

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +3

Query: 60  IDNNCIMV*KCSSNLQYNYNEAVVFLNSPSSSTEPNPHKL 179
           + N+C     C +  +  YN A+VF+N+ S+    N  +L
Sbjct: 19  VQNSCTKAPNCLAFTESQYNIAIVFMNNTSNECSANTTEL 58


>Z73896-8|CAA98061.1|  525|Caenorhabditis elegans Hypothetical
           protein B0564.9 protein.
          Length = 525

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
 Frame = -1

Query: 326 LNSLQIGCYENFFFTNSFVSMVMLSSFKQQN---IINITF*ICSGPITCWMV*FVGIGFC 156
           L  L + C E +   NS +++  L++ KQ +   I+N+   +C     C  + ++ I FC
Sbjct: 396 LEELSLDCCE-YLTVNSLITLGNLNNLKQLSLPGIVNVDDSVCLQISRCSKLTYLNINFC 454

Query: 155 R 153
           R
Sbjct: 455 R 455


>Z73422-12|CAJ76980.1|  525|Caenorhabditis elegans Hypothetical
           protein B0564.9 protein.
          Length = 525

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
 Frame = -1

Query: 326 LNSLQIGCYENFFFTNSFVSMVMLSSFKQQN---IINITF*ICSGPITCWMV*FVGIGFC 156
           L  L + C E +   NS +++  L++ KQ +   I+N+   +C     C  + ++ I FC
Sbjct: 396 LEELSLDCCE-YLTVNSLITLGNLNNLKQLSLPGIVNVDDSVCLQISRCSKLTYLNINFC 454

Query: 155 R 153
           R
Sbjct: 455 R 455


>Z73422-11|CAA97768.1|  423|Caenorhabditis elegans Hypothetical
           protein B0564.6b protein.
          Length = 423

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
 Frame = -1

Query: 326 LNSLQIGCYENFFFTNSFVSMVMLSSFKQQN---IINITF*ICSGPITCWMV*FVGIGFC 156
           L  L + C E +   NS +++  L++ KQ +   I+N+   +C     C  + ++ I FC
Sbjct: 294 LEELSLDCCE-YLTVNSLITLGNLNNLKQLSLPGIVNVDDSVCLQISRCSKLTYLNINFC 352

Query: 155 R 153
           R
Sbjct: 353 R 353


>Z73422-10|CAA97772.1|  525|Caenorhabditis elegans Hypothetical
           protein B0564.6a protein.
          Length = 525

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
 Frame = -1

Query: 326 LNSLQIGCYENFFFTNSFVSMVMLSSFKQQN---IINITF*ICSGPITCWMV*FVGIGFC 156
           L  L + C E +   NS +++  L++ KQ +   I+N+   +C     C  + ++ I FC
Sbjct: 396 LEELSLDCCE-YLTVNSLITLGNLNNLKQLSLPGIVNVDDSVCLQISRCSKLTYLNINFC 454

Query: 155 R 153
           R
Sbjct: 455 R 455


>Z93397-3|CAB07720.2|  376|Caenorhabditis elegans Hypothetical
           protein ZC482.6 protein.
          Length = 376

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 21/69 (30%), Positives = 33/69 (47%)
 Frame = -3

Query: 297 KFFFYKQFRFHGDVVVF*TAKYNKYYLLNLFRAHNLLDGLICGDWVL*MMRGYLKTQLLH 118
           KF F   F+ H D +VF  A +N  Y++  F    L   ++    +  + R  L+T L++
Sbjct: 25  KFLFENLFKNHYDKIVFLLATFNTLYVIASFSGFFL--NMV---HLAVLTRKALRTNLVY 79

Query: 117 YNYIADCLN 91
              I  CLN
Sbjct: 80  TVMIGICLN 88


>Z75527-1|CAA99774.1|  441|Caenorhabditis elegans Hypothetical
           protein C15C8.1 protein.
          Length = 441

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 13/21 (61%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
 Frame = +3

Query: 249 RRQHHH-GNETVCKKKIFIAT 308
           RRQHH  GN T  + K+FIAT
Sbjct: 320 RRQHHPTGNPTATQNKVFIAT 340


>Z54218-2|CAA90956.1|  352|Caenorhabditis elegans Hypothetical
           protein F37B12.3 protein.
          Length = 352

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
 Frame = -3

Query: 345 FD*FYFIKFVTNWL-L*KFFFYKQFRFHGDVVVF*TAKYNKYYLLNLFRAHNLLD-GLIC 172
           F  +Y I   TN L L    FY  +RF    ++F   ++ K YL N+     +LD G IC
Sbjct: 75  FPEYYLIFSYTNELYLQNSRFYILYRFFKPNIIFLQNQFEKLYLRNMIIRIQMLDVGWIC 134


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,122,413
Number of Sequences: 27780
Number of extensions: 235292
Number of successful extensions: 584
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 584
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)