Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22c19
         (686 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    23   3.1  
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    23   3.1  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   5.4  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   7.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.2  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   9.5  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +1

Query: 334 SYIDHLEKLNKQLEGGLEKAKEIEDKIKQ 420
           +YID L   ++ L   LE  +++ +K+KQ
Sbjct: 456 NYIDDLLVASETLNEHLEHLRQVFEKLKQ 484


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +1

Query: 334 SYIDHLEKLNKQLEGGLEKAKEIEDKIKQQYAESQHREK 450
           SY+D L +  +    GLE  K + D I+   ++   ++K
Sbjct: 47  SYVDCLLEKGRCSPDGLELKKNMPDAIETDCSKCSEKQK 85


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 13/48 (27%), Positives = 18/48 (37%)
 Frame = -2

Query: 322 STRSGAHRQKQRLAAAGSITLGWSSCHHHRCCLHTLPHHGALSPRTLH 179
           S R  A +Q    AA  +      + HH     H + HH A +    H
Sbjct: 302 SQRQAAQQQNNNNAATNNQNHHHHAGHHIHAQHHVVNHHVAANGSLKH 349


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 455 STFSLCCDSAYCCF 414
           STFS+C    Y C+
Sbjct: 242 STFSICITQFYYCY 255


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -1

Query: 449 FSLCCDSAYCCFILSSISFAF 387
           F LC    YC FI+ ++   F
Sbjct: 142 FLLCIYYFYCAFIIFTVHLLF 162


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = -1

Query: 449 FSLCCDSAYCCFILSSISFAFSKP 378
           FSL  D+  C F L SI   F  P
Sbjct: 226 FSLVEDTLPCVFFLGSILIFFIFP 249


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,883
Number of Sequences: 336
Number of extensions: 2702
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)