Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte22c11
(654 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41745-1|AAC50462.1| 181|Homo sapiens PDGF associated protein p... 61 4e-09
BC007873-1|AAH07873.1| 181|Homo sapiens PDGFA associated protei... 61 4e-09
BC000684-1|AAH00684.1| 181|Homo sapiens PDGFA associated protei... 61 4e-09
AC004922-1|AAF03506.1| 181|Homo sapiens unknown protein. 61 4e-09
U65960-1|AAB07135.1| 171|Homo sapiens HASPP28 protein. 54 4e-07
Y16792-1|CAA76388.1| 467|Homo sapiens type I hair keratin 6 pro... 30 8.3
BC043581-1|AAH43581.1| 417|Homo sapiens KRT36 protein protein. 30 8.3
>U41745-1|AAC50462.1| 181|Homo sapiens PDGF associated protein
protein.
Length = 181
Score = 60.9 bits (141), Expect = 4e-09
Identities = 43/138 (31%), Positives = 58/138 (42%), Gaps = 3/138 (2%)
Frame = +3
Query: 144 MPRG-KFTNHKGRNRKFTSPEELEEQRKHDEQKKKWRKEQXXXXXXXXXXXXXXXXXXXX 320
MP+G + HKGR R++TSPEE++ Q + ++QK + +EQ
Sbjct: 1 MPKGGRKGGHKGRARQYTSPEEIDAQLQAEKQKAREEEEQKEGGDGAAGDPKKEKKSLDS 60
Query: 321 XXXXXXX--HPTKAKGVSGLIEVENPNRVVXXXXXXXXXXXXGDVEKPQLSXXXXXXXXX 494
+ K KGV GLI++ENPNRV G E LS
Sbjct: 61 DESEDEEDDYQQKRKGVEGLIDIENPNRVAQTTKKVTQLDLDGPKE---LSRREREEIEK 117
Query: 495 XXXXXXYQKLHAEGKTEQ 548
Y K+H GKTEQ
Sbjct: 118 QKAKERYMKMHLAGKTEQ 135
>BC007873-1|AAH07873.1| 181|Homo sapiens PDGFA associated protein 1
protein.
Length = 181
Score = 60.9 bits (141), Expect = 4e-09
Identities = 43/138 (31%), Positives = 58/138 (42%), Gaps = 3/138 (2%)
Frame = +3
Query: 144 MPRG-KFTNHKGRNRKFTSPEELEEQRKHDEQKKKWRKEQXXXXXXXXXXXXXXXXXXXX 320
MP+G + HKGR R++TSPEE++ Q + ++QK + +EQ
Sbjct: 1 MPKGGRKGGHKGRARQYTSPEEIDAQLQAEKQKAREEEEQKEGGDGAAGDPKKEKKSLDS 60
Query: 321 XXXXXXX--HPTKAKGVSGLIEVENPNRVVXXXXXXXXXXXXGDVEKPQLSXXXXXXXXX 494
+ K KGV GLI++ENPNRV G E LS
Sbjct: 61 DESEDEEDDYQQKRKGVEGLIDIENPNRVAQTTKKVTQLDLDGPKE---LSRREREEIEK 117
Query: 495 XXXXXXYQKLHAEGKTEQ 548
Y K+H GKTEQ
Sbjct: 118 QKAKERYMKMHLAGKTEQ 135
>BC000684-1|AAH00684.1| 181|Homo sapiens PDGFA associated protein 1
protein.
Length = 181
Score = 60.9 bits (141), Expect = 4e-09
Identities = 43/138 (31%), Positives = 58/138 (42%), Gaps = 3/138 (2%)
Frame = +3
Query: 144 MPRG-KFTNHKGRNRKFTSPEELEEQRKHDEQKKKWRKEQXXXXXXXXXXXXXXXXXXXX 320
MP+G + HKGR R++TSPEE++ Q + ++QK + +EQ
Sbjct: 1 MPKGGRKGGHKGRARQYTSPEEIDAQLQAEKQKAREEEEQKEGGDGAAGDPKKEKKSLDS 60
Query: 321 XXXXXXX--HPTKAKGVSGLIEVENPNRVVXXXXXXXXXXXXGDVEKPQLSXXXXXXXXX 494
+ K KGV GLI++ENPNRV G E LS
Sbjct: 61 DESEDEEDDYQQKRKGVEGLIDIENPNRVAQTTKKVTQLDLDGPKE---LSRREREEIEK 117
Query: 495 XXXXXXYQKLHAEGKTEQ 548
Y K+H GKTEQ
Sbjct: 118 QKAKERYMKMHLAGKTEQ 135
>AC004922-1|AAF03506.1| 181|Homo sapiens unknown protein.
Length = 181
Score = 60.9 bits (141), Expect = 4e-09
Identities = 43/138 (31%), Positives = 58/138 (42%), Gaps = 3/138 (2%)
Frame = +3
Query: 144 MPRG-KFTNHKGRNRKFTSPEELEEQRKHDEQKKKWRKEQXXXXXXXXXXXXXXXXXXXX 320
MP+G + HKGR R++TSPEE++ Q + ++QK + +EQ
Sbjct: 1 MPKGGRKGGHKGRARQYTSPEEIDAQLQAEKQKAREEEEQKEGGDGAAGDPKKEKKSLDS 60
Query: 321 XXXXXXX--HPTKAKGVSGLIEVENPNRVVXXXXXXXXXXXXGDVEKPQLSXXXXXXXXX 494
+ K KGV GLI++ENPNRV G E LS
Sbjct: 61 DESEDEEDDYQQKRKGVEGLIDIENPNRVAQTTKKVTQLDLDGPKE---LSRREREEIEK 117
Query: 495 XXXXXXYQKLHAEGKTEQ 548
Y K+H GKTEQ
Sbjct: 118 QKAKERYMKMHLAGKTEQ 135
>U65960-1|AAB07135.1| 171|Homo sapiens HASPP28 protein.
Length = 171
Score = 54.0 bits (124), Expect = 4e-07
Identities = 38/134 (28%), Positives = 53/134 (39%), Gaps = 2/134 (1%)
Frame = +3
Query: 153 GKFTNHKGRNRKFTSPEELEEQRKHDEQKKKWRKEQXXXXXXXXXXXXXXXXXXXXXXXX 332
G+ HKG R++TSPEE++ Q + ++QK + +EQ
Sbjct: 6 GRKGGHKGWARQYTSPEEIDTQLQSEKQKAREEEEQKEGGDGAAGDPKKEKKSLDSDESE 65
Query: 333 XXX--HPTKAKGVSGLIEVENPNRVVXXXXXXXXXXXXGDVEKPQLSXXXXXXXXXXXXX 506
+ K KGV G I++ENPNRV G E LS
Sbjct: 66 DEDDDYQQKRKGVEGFIDIENPNRVAQTTKKVTQLDLDGPKE---LSRREREEIEKQKAK 122
Query: 507 XXYQKLHAEGKTEQ 548
Y ++H GKTEQ
Sbjct: 123 ERYMRMHLAGKTEQ 136
>Y16792-1|CAA76388.1| 467|Homo sapiens type I hair keratin 6
protein.
Length = 467
Score = 29.9 bits (64), Expect = 8.3
Identities = 17/73 (23%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = +1
Query: 439 LEMWRNHNCQDVNVKR*NASEQLQPIRSFTLKVKRSKRAL-TSLDSPSFANNAKKQLSAE 615
+E W N +++N + ++SEQLQ ++ ++++R+ AL L + N+ + AE
Sbjct: 280 VEAWFNTQTEELNQQVVSSSEQLQCCQTEIIELRRTVNALEIELQAQHSMRNSLESTLAE 339
Query: 616 RQRKNLKKILQLK 654
+ + ++ Q++
Sbjct: 340 TEARYSSQLAQMQ 352
>BC043581-1|AAH43581.1| 417|Homo sapiens KRT36 protein protein.
Length = 417
Score = 29.9 bits (64), Expect = 8.3
Identities = 17/73 (23%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = +1
Query: 439 LEMWRNHNCQDVNVKR*NASEQLQPIRSFTLKVKRSKRAL-TSLDSPSFANNAKKQLSAE 615
+E W N +++N + ++SEQLQ ++ ++++R+ AL L + N+ + AE
Sbjct: 230 VEAWFNTQTEELNQQVVSSSEQLQCCQTEIIELRRTVNALEIELQAQHSMRNSLESTLAE 289
Query: 616 RQRKNLKKILQLK 654
+ + ++ Q++
Sbjct: 290 TEARYSSQLAQMQ 302
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,448,682
Number of Sequences: 237096
Number of extensions: 717561
Number of successful extensions: 1966
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1956
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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