Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22c03
         (424 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83240-2|CAB05814.2|  360|Caenorhabditis elegans Hypothetical pr...    30   0.79 
Z81556-1|CAB04524.1|  965|Caenorhabditis elegans Hypothetical pr...    28   2.4  
Z81522-6|CAB04230.1|  277|Caenorhabditis elegans Hypothetical pr...    28   2.4  
Z66519-10|CAD59139.1|  446|Caenorhabditis elegans Hypothetical p...    28   2.4  
Z75546-7|CAA99895.1|  566|Caenorhabditis elegans Hypothetical pr...    27   4.2  
AF024503-3|AAG24098.3|  331|Caenorhabditis elegans Serpentine re...    27   4.2  
AF024503-2|AAG24099.1|  331|Caenorhabditis elegans Serpentine re...    27   4.2  
U97403-9|AAB52469.1|  389|Caenorhabditis elegans Hypothetical pr...    27   5.5  
Z72505-6|CAA96613.2|  358|Caenorhabditis elegans Hypothetical pr...    27   7.3  
U41625-5|AAA83327.1|  700|Caenorhabditis elegans Suppressor of a...    27   7.3  
AY091467-1|AAM44123.1|  700|Caenorhabditis elegans SUR-5 protein.      27   7.3  
AF216966-1|AAF23508.1|  358|Caenorhabditis elegans seven transme...    27   7.3  
Z66519-9|CAA91380.1|  448|Caenorhabditis elegans Hypothetical pr...    26   9.7  
AC006635-1|AAY86194.1|  201|Caenorhabditis elegans Hypothetical ...    26   9.7  

>Z83240-2|CAB05814.2|  360|Caenorhabditis elegans Hypothetical
           protein T23H4.3 protein.
          Length = 360

 Score = 29.9 bits (64), Expect = 0.79
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +3

Query: 21  CDSCSAPTDSLSTPTSWTACCKYWKRTKTV 110
           C SCSAPT + +T +   +    W+R K++
Sbjct: 329 CSSCSAPTSTTTTTSGTPSDGSLWQRIKSI 358


>Z81556-1|CAB04524.1|  965|Caenorhabditis elegans Hypothetical
           protein F58G1.1 protein.
          Length = 965

 Score = 28.3 bits (60), Expect = 2.4
 Identities = 19/65 (29%), Positives = 27/65 (41%)
 Frame = +2

Query: 71  DCMLQVLEKDENCNIYYEDLLKFLDFQTRPVFNLTEDDYQKVVRHAPPLKDTECKLWAEN 250
           D  L V ++  N N Y  +LLK    Q   +  LT    QK  + +  L D   +L    
Sbjct: 404 DTNLIVSKERGNINFYPMELLKISSHQRVQIPQLTSAQSQKTTKESAVLPDVRQRLILTG 463

Query: 251 ENLIQ 265
           +N  Q
Sbjct: 464 KNAAQ 468


>Z81522-6|CAB04230.1|  277|Caenorhabditis elegans Hypothetical
           protein F32B4.5 protein.
          Length = 277

 Score = 28.3 bits (60), Expect = 2.4
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -2

Query: 264 WMRFSFSAHNLHSVSFSGGACLTTF**SSSVRLNTGRV 151
           W R +  A  L  +SF   AC +T   S    L+TGR+
Sbjct: 125 WARLAVEAKRLGLISFVEAACPSTISISCHAALSTGRI 162


>Z66519-10|CAD59139.1|  446|Caenorhabditis elegans Hypothetical
           protein B0334.11b protein.
          Length = 446

 Score = 28.3 bits (60), Expect = 2.4
 Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 6/69 (8%)
 Frame = -1

Query: 229 LSIFQRWRVPDDLLIIILRQIEHWSSLE------IQKLQQIFIVNVTVFVLFQYLQHAVH 68
           LS+  + + PD  L +ILRQ+ H + ++      I+K  QI I   ++ VL +YL++   
Sbjct: 50  LSVRNQVQKPDQSLRLILRQLLHETKIDYHLEGSIKKDVQIKISRHSMSVLSKYLKNDEA 109

Query: 67  EVGVDSESV 41
           ++  + E+V
Sbjct: 110 DLAEEREAV 118


>Z75546-7|CAA99895.1|  566|Caenorhabditis elegans Hypothetical
           protein R05D11.8 protein.
          Length = 566

 Score = 27.5 bits (58), Expect = 4.2
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +2

Query: 80  LQVLEKDENCNIYYEDLLKFLDFQTRPVFNLTEDDYQKV 196
           L++ EKDEN + YYE + KF   Q    +    DD  +V
Sbjct: 253 LKLFEKDENDDQYYETVEKFKCSQNFAHYENIIDDENRV 291


>AF024503-3|AAG24098.3|  331|Caenorhabditis elegans Serpentine
           receptor, class j protein6 protein.
          Length = 331

 Score = 27.5 bits (58), Expect = 4.2
 Identities = 10/34 (29%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = -1

Query: 319 KMFQVELAQECIPVDVAFLDEILV-FGPQFALSI 221
           ++F+  +AQ CIP+  +FL  ++  + P F +++
Sbjct: 240 QLFKALVAQTCIPMFASFLPTVIAWYAPMFLINV 273


>AF024503-2|AAG24099.1|  331|Caenorhabditis elegans Serpentine
           receptor, class j protein5 protein.
          Length = 331

 Score = 27.5 bits (58), Expect = 4.2
 Identities = 10/34 (29%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = -1

Query: 319 KMFQVELAQECIPVDVAFLDEILV-FGPQFALSI 221
           ++F+  +AQ CIP+  +FL  ++  + P F +++
Sbjct: 240 QLFKALVAQTCIPMFASFLPTVIAWYAPMFLINV 273


>U97403-9|AAB52469.1|  389|Caenorhabditis elegans Hypothetical
           protein T10E9.1 protein.
          Length = 389

 Score = 27.1 bits (57), Expect = 5.5
 Identities = 10/24 (41%), Positives = 18/24 (75%)
 Frame = -1

Query: 208 RVPDDLLIIILRQIEHWSSLEIQK 137
           ++PDD  +++L + E+W +LEI K
Sbjct: 294 QLPDDQRLVVLWKSENWINLEIGK 317


>Z72505-6|CAA96613.2|  358|Caenorhabditis elegans Hypothetical
           protein C50C10.7 protein.
          Length = 358

 Score = 26.6 bits (56), Expect = 7.3
 Identities = 11/44 (25%), Positives = 26/44 (59%)
 Frame = -1

Query: 376 TIPIQIIKNINVNLRLFFHKMFQVELAQECIPVDVAFLDEILVF 245
           T  +++I+NI+ +++    ++F   L Q  IP+ + ++   +VF
Sbjct: 233 TKKLEMIENISDSIKSLQRQLFNALLIQSAIPLFLMYMPAAMVF 276


>U41625-5|AAA83327.1|  700|Caenorhabditis elegans Suppressor of
           activated let-60ras protein 5 protein.
          Length = 700

 Score = 26.6 bits (56), Expect = 7.3
 Identities = 26/105 (24%), Positives = 41/105 (39%)
 Frame = +2

Query: 101 ENCNIYYEDLLKFLDFQTRPVFNLTEDDYQKVVRHAPPLKDTECKLWAENENLIQEGYVN 280
           +N  I++EDLLK  D +    +N   D   K+                  EN+I+ G   
Sbjct: 85  DNYGIFWEDLLKLSDVKLHQNYNQVIDHNLKINERPRWFNGATLNY---TENVIERGTAT 141

Query: 281 WNAFLCQLNLEHLVKEQS*IYIYIFDNLDWNRI*FLTKIKRFSFG 415
             A L   ++E  V E      Y +DNL  +     T ++ +  G
Sbjct: 142 DIAVL-NASIEETVTE------YTYDNLRKDVYRIATSLRNYGIG 179


>AY091467-1|AAM44123.1|  700|Caenorhabditis elegans SUR-5 protein.
          Length = 700

 Score = 26.6 bits (56), Expect = 7.3
 Identities = 26/105 (24%), Positives = 41/105 (39%)
 Frame = +2

Query: 101 ENCNIYYEDLLKFLDFQTRPVFNLTEDDYQKVVRHAPPLKDTECKLWAENENLIQEGYVN 280
           +N  I++EDLLK  D +    +N   D   K+                  EN+I+ G   
Sbjct: 85  DNYGIFWEDLLKLSDVKLHQNYNQVIDHNLKINERPRWFNGATLNY---TENVIERGTAT 141

Query: 281 WNAFLCQLNLEHLVKEQS*IYIYIFDNLDWNRI*FLTKIKRFSFG 415
             A L   ++E  V E      Y +DNL  +     T ++ +  G
Sbjct: 142 DIAVL-NASIEETVTE------YTYDNLRKDVYRIATSLRNYGIG 179


>AF216966-1|AAF23508.1|  358|Caenorhabditis elegans seven
           transmembrane receptor 2 protein.
          Length = 358

 Score = 26.6 bits (56), Expect = 7.3
 Identities = 11/44 (25%), Positives = 26/44 (59%)
 Frame = -1

Query: 376 TIPIQIIKNINVNLRLFFHKMFQVELAQECIPVDVAFLDEILVF 245
           T  +++I+NI+ +++    ++F   L Q  IP+ + ++   +VF
Sbjct: 233 TKKLEMIENISDSIKSLQRQLFNALLIQSAIPLFLMYMPAAMVF 276


>Z66519-9|CAA91380.1|  448|Caenorhabditis elegans Hypothetical
           protein B0334.11a protein.
          Length = 448

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
 Frame = -1

Query: 202 PDDLLIIILRQIEHWSSLE------IQKLQQIFIVNVTVFVLFQYLQHAVHEVGVDSESV 41
           PD  L +ILRQ+ H + ++      I+K  QI I   ++ VL +YL++   ++  + E+V
Sbjct: 61  PDQSLRLILRQLLHETKIDYHLEGSIKKDVQIKISRHSMSVLSKYLKNDEADLAEEREAV 120


>AC006635-1|AAY86194.1|  201|Caenorhabditis elegans Hypothetical
           protein F38G1.3 protein.
          Length = 201

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +3

Query: 9   RRSACDSCSAPTDSLSTPTSWTACCKYWKRTK 104
           ++  CD C +PT S ST T+ T       R K
Sbjct: 110 QKCECDVCRSPTTSTSTTTTTTQITPSMHRKK 141


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,194,438
Number of Sequences: 27780
Number of extensions: 221307
Number of successful extensions: 685
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 651
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 685
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 692685370
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)