Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte22b24
(580 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC039295-1|AAH39295.1| 530|Homo sapiens family with sequence si... 61 3e-09
AC007272-2|AAX88971.1| 111|Homo sapiens unknown protein. 61 3e-09
BC018710-1|AAH18710.1| 521|Homo sapiens family with sequence si... 58 2e-08
AK056319-1|BAB71148.1| 521|Homo sapiens protein ( Homo sapiens ... 58 2e-08
AC006039-1|AAS07519.1| 208|Homo sapiens unknown protein. 58 2e-08
AB030241-1|BAB39849.1| 521|Homo sapiens DRCTNNB1A protein. 58 2e-08
AB065831-1|BAC06050.1| 309|Homo sapiens seven transmembrane hel... 29 9.0
>BC039295-1|AAH39295.1| 530|Homo sapiens family with sequence
similarity 126, member B protein.
Length = 530
Score = 60.9 bits (141), Expect = 3e-09
Identities = 35/95 (36%), Positives = 55/95 (57%)
Frame = +1
Query: 280 LITEWLNEYTSLQENEVQSFAAEHEHNHEIATAIFNLFYCEDETVTYNCELENDAQLVQI 459
++ EWL+E+ +L + ++ S+AA + A++ + +D N EL
Sbjct: 8 VVEEWLSEFKALPDTQITSYAATLHRKKTLVPALYKVI--QDS----NNEL--------- 52
Query: 460 LENVCTQLFSFYRSKEIQLQRFTLQFIPTLIYNYL 564
LE VC QLF YRS E++L+RFTLQF+P L++ YL
Sbjct: 53 LEPVCHQLFELYRSSEVRLKRFTLQFLPELMWVYL 87
>AC007272-2|AAX88971.1| 111|Homo sapiens unknown protein.
Length = 111
Score = 60.9 bits (141), Expect = 3e-09
Identities = 35/95 (36%), Positives = 55/95 (57%)
Frame = +1
Query: 280 LITEWLNEYTSLQENEVQSFAAEHEHNHEIATAIFNLFYCEDETVTYNCELENDAQLVQI 459
++ EWL+E+ +L + ++ S+AA + A++ + +D N EL
Sbjct: 8 VVEEWLSEFKALPDTQITSYAATLHRKKTLVPALYKVI--QDS----NNEL--------- 52
Query: 460 LENVCTQLFSFYRSKEIQLQRFTLQFIPTLIYNYL 564
LE VC QLF YRS E++L+RFTLQF+P L++ YL
Sbjct: 53 LEPVCHQLFELYRSSEVRLKRFTLQFLPELMWVYL 87
>BC018710-1|AAH18710.1| 521|Homo sapiens family with sequence
similarity 126, member A protein.
Length = 521
Score = 58.4 bits (135), Expect = 2e-08
Identities = 33/98 (33%), Positives = 56/98 (57%)
Frame = +1
Query: 274 KHLITEWLNEYTSLQENEVQSFAAEHEHNHEIATAIFNLFYCEDETVTYNCELENDAQLV 453
K ++ EWL+E+ +L E + ++A + + ++++ + E ++
Sbjct: 6 KGVVEEWLSEFKTLPETSLPNYATNLKDKSSLVSSLYKVIQ-EPQS-------------- 50
Query: 454 QILENVCTQLFSFYRSKEIQLQRFTLQFIPTLIYNYLS 567
++LE VC QLF FYRS E QL +FTLQF+P LI+ YL+
Sbjct: 51 ELLEPVCHQLFEFYRSGEEQLLQFTLQFLPELIWCYLA 88
>AK056319-1|BAB71148.1| 521|Homo sapiens protein ( Homo sapiens
cDNA FLJ31757 fis, clone NT2RI2007572. ).
Length = 521
Score = 58.4 bits (135), Expect = 2e-08
Identities = 33/98 (33%), Positives = 56/98 (57%)
Frame = +1
Query: 274 KHLITEWLNEYTSLQENEVQSFAAEHEHNHEIATAIFNLFYCEDETVTYNCELENDAQLV 453
K ++ EWL+E+ +L E + ++A + + ++++ + E ++
Sbjct: 6 KGVVEEWLSEFKTLPETSLPNYATNLKDKSSLVSSLYKVIQ-EPQS-------------- 50
Query: 454 QILENVCTQLFSFYRSKEIQLQRFTLQFIPTLIYNYLS 567
++LE VC QLF FYRS E QL +FTLQF+P LI+ YL+
Sbjct: 51 ELLEPVCHQLFEFYRSGEEQLLQFTLQFLPELIWCYLA 88
>AC006039-1|AAS07519.1| 208|Homo sapiens unknown protein.
Length = 208
Score = 58.4 bits (135), Expect = 2e-08
Identities = 33/98 (33%), Positives = 56/98 (57%)
Frame = +1
Query: 274 KHLITEWLNEYTSLQENEVQSFAAEHEHNHEIATAIFNLFYCEDETVTYNCELENDAQLV 453
K ++ EWL+E+ +L E + ++A + + ++++ + E ++
Sbjct: 6 KGVVEEWLSEFKTLPETSLPNYATNLKDKSSLVSSLYKVIQ-EPQS-------------- 50
Query: 454 QILENVCTQLFSFYRSKEIQLQRFTLQFIPTLIYNYLS 567
++LE VC QLF FYRS E QL +FTLQF+P LI+ YL+
Sbjct: 51 ELLEPVCHQLFEFYRSGEEQLLQFTLQFLPELIWCYLA 88
>AB030241-1|BAB39849.1| 521|Homo sapiens DRCTNNB1A protein.
Length = 521
Score = 58.4 bits (135), Expect = 2e-08
Identities = 33/98 (33%), Positives = 56/98 (57%)
Frame = +1
Query: 274 KHLITEWLNEYTSLQENEVQSFAAEHEHNHEIATAIFNLFYCEDETVTYNCELENDAQLV 453
K ++ EWL+E+ +L E + ++A + + ++++ + E ++
Sbjct: 6 KGVVEEWLSEFKTLPETSLPNYATNLKDKSSLVSSLYKVIQ-EPQS-------------- 50
Query: 454 QILENVCTQLFSFYRSKEIQLQRFTLQFIPTLIYNYLS 567
++LE VC QLF FYRS E QL +FTLQF+P LI+ YL+
Sbjct: 51 ELLEPVCHQLFEFYRSGEEQLLQFTLQFLPELIWCYLA 88
>AB065831-1|BAC06050.1| 309|Homo sapiens seven transmembrane helix
receptor protein.
Length = 309
Score = 29.5 bits (63), Expect = 9.0
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = -2
Query: 459 YLYKLSVIFEFTIICYSFIFTVK*IKDGCSNFMIMFMFCCKTLNFIFLQRCVFIQPFSY* 280
+L+ LS F +CYS +FT K + D S +I ++ C L F C F+ Y
Sbjct: 62 FLFNLS----FIDLCYSCVFTPKMLNDFVSESIISYVGCMTQLFFF----CFFVNSECYV 113
Query: 279 MLPLRH 262
++ + +
Sbjct: 114 LVSMAY 119
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,093,609
Number of Sequences: 237096
Number of extensions: 1261103
Number of successful extensions: 2038
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2038
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5985693436
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -