Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22b18
         (705 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0220 + 1745719-1745806,1745893-1746062,1746170-1746359,174...    29   3.6  
11_06_0697 + 26371193-26371397,26371562-26374254                       29   4.8  
09_04_0332 + 16767925-16768063,16768288-16768690,16769389-16770361     28   8.3  
08_02_0950 + 22964817-22964952,22965091-22965493,22966351-22967413     28   8.3  

>03_01_0220 +
           1745719-1745806,1745893-1746062,1746170-1746359,
           1748486-1748877,1749218-1749523
          Length = 381

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
 Frame = -3

Query: 556 NPKMNNCIST-AMYQAVCIVNVVVDVQEMLPPIFSAITYFGHSHL-----MPEWSCIDMS 395
           +P ++ C  T A+ Q V I  + +  Q  + PI S +   G +H+     +PE S + +S
Sbjct: 296 DPALHGCYPTSALNQLVVISIMCLQDQPHVRPIISDVV-IGLNHVASQPYVPERSSVSLS 354

Query: 394 HPSRC 380
            P+RC
Sbjct: 355 SPARC 359


>11_06_0697 + 26371193-26371397,26371562-26374254
          Length = 965

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +1

Query: 520 T*PLICNCSFLDYLYIWCAE 579
           T PL+ +  FL +LY+WC E
Sbjct: 662 TYPLLTDKGFLKFLYLWCTE 681


>09_04_0332 + 16767925-16768063,16768288-16768690,16769389-16770361
          Length = 504

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +2

Query: 251 GFLLSYNLQIYEESHEINWKILPKQ 325
           GF    NLQ++   H++ WK+L ++
Sbjct: 74  GFQRDQNLQMHRRRHKVPWKLLKRE 98


>08_02_0950 + 22964817-22964952,22965091-22965493,22966351-22967413
          Length = 533

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +2

Query: 251 GFLLSYNLQIYEESHEINWKILPKQ 325
           GF    NLQ++   H++ WK+L ++
Sbjct: 73  GFQRDQNLQMHRRRHKVPWKLLKRE 97


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,002,632
Number of Sequences: 37544
Number of extensions: 412546
Number of successful extensions: 922
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 922
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1815633512
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)