Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22b16
         (502 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70212-6|CAA94166.1|  336|Caenorhabditis elegans Hypothetical pr...    31   0.36 
U40028-10|AAA81121.3|  363|Caenorhabditis elegans Serpentine rec...    30   1.1  
Z81594-6|CAJ85771.1|  153|Caenorhabditis elegans Hypothetical pr...    28   4.4  
Z81594-5|CAJ85770.1|  262|Caenorhabditis elegans Hypothetical pr...    28   4.4  
Z81594-4|CAB04747.1|  282|Caenorhabditis elegans Hypothetical pr...    28   4.4  

>Z70212-6|CAA94166.1|  336|Caenorhabditis elegans Hypothetical
           protein R04D3.8 protein.
          Length = 336

 Score = 31.5 bits (68), Expect = 0.36
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -3

Query: 500 FFLIFKPFFIHTSIIICTQWLVFVFIEK*NLSMF 399
           F  +F P F  TS+I+ T WL+F+      + +F
Sbjct: 10  FLSLFNPVFFCTSVILQTIWLLFIIFHSAKMGIF 43


>U40028-10|AAA81121.3|  363|Caenorhabditis elegans Serpentine
           receptor, class e (epsilon)protein 40 protein.
          Length = 363

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
 Frame = -3

Query: 281 IQLNVFSQNFHIFIFYEQFLDNQGHLNNLRIILLFV----IWRQKYIGEQRH 138
           +Q   F Q + IF++Y     N G  N + I+ L V    +WR+K+ G  RH
Sbjct: 277 LQYYNFFQEYEIFLYYAIDWVNAG--NTVAIVPLTVALEPVWRRKFFGNIRH 326


>Z81594-6|CAJ85771.1|  153|Caenorhabditis elegans Hypothetical
           protein T20F10.2c protein.
          Length = 153

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
 Frame = -3

Query: 311 NNTLL*SLQWIQ---LNVFSQNFHIFIFYEQFLDNQGHLNNL 195
           NNT L SL   Q   +N  +Q   I  F ++ L N  HLNNL
Sbjct: 18  NNTALNSLVSTQAQLINQLNQTIGIIQFEKEELKNAAHLNNL 59


>Z81594-5|CAJ85770.1|  262|Caenorhabditis elegans Hypothetical
           protein T20F10.2b protein.
          Length = 262

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
 Frame = -3

Query: 311 NNTLL*SLQWIQ---LNVFSQNFHIFIFYEQFLDNQGHLNNL 195
           NNT L SL   Q   +N  +Q   I  F ++ L N  HLNNL
Sbjct: 127 NNTALNSLVSTQAQLINQLNQTIGIIQFEKEELKNAAHLNNL 168


>Z81594-4|CAB04747.1|  282|Caenorhabditis elegans Hypothetical
           protein T20F10.2a protein.
          Length = 282

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
 Frame = -3

Query: 311 NNTLL*SLQWIQ---LNVFSQNFHIFIFYEQFLDNQGHLNNL 195
           NNT L SL   Q   +N  +Q   I  F ++ L N  HLNNL
Sbjct: 147 NNTALNSLVSTQAQLINQLNQTIGIIQFEKEELKNAAHLNNL 188


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,242,157
Number of Sequences: 27780
Number of extensions: 231268
Number of successful extensions: 627
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 627
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 956602620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)