Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22b13
         (650 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0619 + 4588779-4588811,4590173-4590245,4590341-4590389,459...    66   3e-11
07_03_0370 - 17366063-17366197,17367445-17367483,17367930-173680...    28   5.6  
04_04_1099 - 30886361-30886591,30886739-30886941,30887030-308875...    28   7.4  
10_06_0102 + 10758601-10758948,10759051-10759257,10759349-107595...    27   9.8  

>07_01_0619 +
           4588779-4588811,4590173-4590245,4590341-4590389,
           4590473-4590596,4591320-4591370
          Length = 109

 Score = 65.7 bits (153), Expect = 3e-11
 Identities = 28/46 (60%), Positives = 39/46 (84%)
 Frame = +3

Query: 147 DSKREEFRRYLERAGVMDALTKVLVSLYEEPDKPEDALEYVRKHLG 284
           ++K+E FR+YLE +GV+D LTKVLV+LYEE DKP  A+E+V++ LG
Sbjct: 14  EAKKEAFRKYLESSGVLDTLTKVLVALYEENDKPSSAVEFVQQKLG 59


>07_03_0370 -
           17366063-17366197,17367445-17367483,17367930-17368001,
           17368287-17368478,17368660-17368781,17369394-17369496,
           17370786-17370836,17371199-17371275,17371646-17371757
          Length = 300

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
 Frame = +3

Query: 111 KIF*NMSSYKPIDSKREEFRRYLERAGVMDALTKVLV-SLYEEPDKPEDALEYVRKHLGS 287
           KI  N+     + +  +EF + + +AGVM+ +    V S  +  D  E+  E V K L S
Sbjct: 131 KIVNNLMKAPELAATMQEFSKEMTKAGVMEEMVNDAVDSALDSEDMEEEIEEEVDKVLAS 190

Query: 288 DGG 296
             G
Sbjct: 191 VAG 193


>04_04_1099 -
           30886361-30886591,30886739-30886941,30887030-30887555,
           30887751-30887988,30888592-30888695,30888784-30889059,
           30889216-30889218
          Length = 526

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 16/36 (44%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
 Frame = -2

Query: 139 LYEDIF*NIFAEIPNNFLRINTVLYSNL-RKLSNAS 35
           LY+++F + FAEIP +FL  + ++   + RKLS AS
Sbjct: 372 LYKNVFISSFAEIPGSFL--SAMIVDRIGRKLSMAS 405


>10_06_0102 + 10758601-10758948,10759051-10759257,10759349-10759507,
            10759617-10759709,10759913-10760008,10760457-10760724,
            10760805-10761047,10761298-10761422,10761499-10761615,
            10761705-10761779,10761886-10761942,10762035-10762139,
            10762244-10762330,10762790-10763047,10763075-10763263,
            10763418-10763528,10763640-10763729,10763814-10763990,
            10764075-10764152,10764412-10764726,10764819-10765162,
            10765304-10765541,10765631-10765998,10766106-10766316,
            10766622-10766801,10766886-10769045,10769151-10769207
          Length = 2251

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = +3

Query: 147  DSKREEFRRYLERAGVMDALTKVLVSLYEEPDKPEDALEYVRK-HLGSDG 293
            +  R  F R L R    DAL K +     E    + AL+Y++K +L S+G
Sbjct: 2122 EESRSFFYRRLRRRVTEDALAKEIREAAGEQLSQKSALDYIKKWYLSSNG 2171


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,919,313
Number of Sequences: 37544
Number of extensions: 175753
Number of successful extensions: 385
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 385
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)