Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22b07
         (641 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0227 - 1718726-1721183,1721804-1721957,1722090-1722165,172...    30   1.8  
04_01_0050 - 536390-537231,538108-538375                               30   1.8  
11_01_0230 - 1788199-1789746                                           29   4.1  
03_02_0598 + 9727112-9727315,9727544-9727631,9728550-9728758,972...    28   5.5  
01_05_0535 - 23001864-23005052                                         28   7.2  
09_02_0407 - 8635717-8636122,8636342-8636729,8637040-8637379           27   9.6  

>12_01_0227 -
           1718726-1721183,1721804-1721957,1722090-1722165,
           1722327-1722485,1722552-1722662,1722791-1722841,
           1722948-1723192,1723745-1725278
          Length = 1595

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 19/59 (32%), Positives = 29/59 (49%)
 Frame = +1

Query: 457 VIYFSYLLKKVLKEEALPTIEHQFHPLLDQQQSILKVQELLIDPQNSCYSTDYIEQSPE 633
           ++Y SY L + L E+   T   + HPLL    + +K     +D     +ST+ I  SPE
Sbjct: 15  ILYMSYHLTRTLAEKKPTTHGLKAHPLLGHLPAFVKNSHRFLD-----WSTELIAGSPE 68


>04_01_0050 - 536390-537231,538108-538375
          Length = 369

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 13/56 (23%), Positives = 23/56 (41%)
 Frame = +1

Query: 295 NYQMPLSFFQPTTPTRLINWTKSMGINLKATDSICQFHFKEEHIKMYDKIKIGEVI 462
           N  +    F    P R++ WT   GI       +   H + EH+ ++  IK   ++
Sbjct: 107 NGSLDRQLFPKEKPGRILGWTTRYGIVTDIAAGLHYVHHEHEHMVLHRDIKASNIL 162


>11_01_0230 - 1788199-1789746
          Length = 515

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 18/59 (30%), Positives = 29/59 (49%)
 Frame = +1

Query: 457 VIYFSYLLKKVLKEEALPTIEHQFHPLLDQQQSILKVQELLIDPQNSCYSTDYIEQSPE 633
           ++Y SY L + L E+   T   + HPLL    + ++     +D     +ST+ I  SPE
Sbjct: 15  ILYMSYHLTRTLAEKKPTTHGLKAHPLLGHLPAFVRNSHRFLD-----WSTELIAGSPE 68


>03_02_0598 +
           9727112-9727315,9727544-9727631,9728550-9728758,
           9728850-9728996,9729338-9729385
          Length = 231

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +3

Query: 69  LDYLHKCSRVIDGLTCLLII*FLMYSDIY 155
           LD+LH C  +   + C L+  FL++ DIY
Sbjct: 154 LDFLHYCVTLTSEMNCSLV--FLIHEDIY 180


>01_05_0535 - 23001864-23005052
          Length = 1062

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
 Frame = +1

Query: 328 TTPTR-LINWTKSMGINLKATDSICQF 405
           TTP R LI W   M +  K  D+IC F
Sbjct: 232 TTPVRDLITWNALMSVYAKRGDAICTF 258


>09_02_0407 - 8635717-8636122,8636342-8636729,8637040-8637379
          Length = 377

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = +1

Query: 322 QPTTPTRLINWTKSMGINLKATDSICQFHFKEEHIKMYDKIKIGEVI 462
           Q  TPT  I W   +GI    T  +   H   EH+ ++  IK   V+
Sbjct: 270 QDNTPT--IGWAMRLGIIKGITSGLFYLHEDWEHVVIHRDIKTSNVL 314


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,797,840
Number of Sequences: 37544
Number of extensions: 219522
Number of successful extensions: 388
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 385
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 388
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1584867848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)