Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte22b02
(671 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC005995-1|AAH05995.1| 223|Homo sapiens GINS complex subunit 4 ... 117 4e-26
BC027454-1|AAH27454.1| 100|Homo sapiens GINS4 protein protein. 86 9e-17
U81802-1|AAC51156.1| 801|Homo sapiens PtdIns 4-kinase protein. 31 5.0
BC040300-1|AAH40300.1| 801|Homo sapiens PI4KB protein protein. 31 5.0
BC000029-1|AAH00029.1| 801|Homo sapiens PIK4CB protein protein. 31 5.0
AY334562-1|AAQ76829.1| 415|Homo sapiens GRINL1A complex protein... 31 5.0
AL391069-11|CAH70326.1| 828|Homo sapiens phosphatidylinositol 4... 31 5.0
AL391069-9|CAH70325.1| 801|Homo sapiens phosphatidylinositol 4-... 31 5.0
AL391069-8|CAH70324.1| 816|Homo sapiens phosphatidylinositol 4-... 31 5.0
AJ011123-1|CAA09496.1| 816|Homo sapiens NPIK-C protein protein. 31 5.0
AJ011121-1|CAA09495.1| 816|Homo sapiens NPIK-A protein protein. 31 5.0
AB005910-1|BAA21661.1| 828|Homo sapiens phosphatidylinositol 4-... 31 5.0
AY353058-1|AAQ76834.1| 438|Homo sapiens GRINL1A combined protei... 30 8.7
AY237639-1|AAP75897.1| 438|Homo sapiens GRINL1A upstream protei... 30 8.7
>BC005995-1|AAH05995.1| 223|Homo sapiens GINS complex subunit 4
(Sld5 homolog) protein.
Length = 223
Score = 117 bits (281), Expect = 4e-26
Identities = 47/126 (37%), Positives = 89/126 (70%)
Frame = +2
Query: 293 DEEEVTAETVLKTLQSAWQNERLSPEILPHQNDMVECMLGQIQHMERNINKLSKTDLRTS 472
+E +T +++ L+ AW NE+ +PE+L + ++VEC++ Q++HME N+ + + DL+ S
Sbjct: 17 EEVVLTPAELIERLEQAWMNEKFAPELLESKPEIVECVMEQLEHMEENLRRAKREDLKVS 76
Query: 473 IHKMEISRIKFIICNYLKTRLNKIEKYCIPILNQERQRIETDTNYLTPSEYKYAQEYVLN 652
IH+ME+ RI++++ +YL+ RL KIEK+ +L +E+ R E + + L+P E +A+E++ N
Sbjct: 77 IHQMEMERIRYVLSSYLRCRLMKIEKFFPHVLEKEKTRPEGEPSSLSPEELAFAREFMAN 136
Query: 653 MENHMK 670
E+++K
Sbjct: 137 TESYLK 142
>BC027454-1|AAH27454.1| 100|Homo sapiens GINS4 protein protein.
Length = 100
Score = 86.2 bits (204), Expect = 9e-17
Identities = 32/84 (38%), Positives = 61/84 (72%)
Frame = +2
Query: 293 DEEEVTAETVLKTLQSAWQNERLSPEILPHQNDMVECMLGQIQHMERNINKLSKTDLRTS 472
+E +T +++ L+ AW NE+ +PE+L + ++VEC++ Q++HME N+ + + DL+ S
Sbjct: 17 EEVVLTPAELIERLEQAWMNEKFAPELLESKPEIVECVMEQLEHMEENLRRAKREDLKVS 76
Query: 473 IHKMEISRIKFIICNYLKTRLNKI 544
IH+ME+ RI++++ +YL+ RL K+
Sbjct: 77 IHQMEMERIRYVLSSYLRCRLMKV 100
>U81802-1|AAC51156.1| 801|Homo sapiens PtdIns 4-kinase protein.
Length = 801
Score = 30.7 bits (66), Expect = 5.0
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 290 DDEEEVTAETVLKTLQSAWQNERLSPEILPHQNDMVECMLGQIQ 421
D +E+ A VLK LQS W+ ER+ I P++ ++ G I+
Sbjct: 553 DLRQELLAFQVLKQLQSIWEQERVPLWIKPYKILVISADSGMIE 596
>BC040300-1|AAH40300.1| 801|Homo sapiens PI4KB protein protein.
Length = 801
Score = 30.7 bits (66), Expect = 5.0
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 290 DDEEEVTAETVLKTLQSAWQNERLSPEILPHQNDMVECMLGQIQ 421
D +E+ A VLK LQS W+ ER+ I P++ ++ G I+
Sbjct: 553 DLRQELLAFQVLKQLQSIWEQERVPLWIKPYKILVISADSGMIE 596
>BC000029-1|AAH00029.1| 801|Homo sapiens PIK4CB protein protein.
Length = 801
Score = 30.7 bits (66), Expect = 5.0
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 290 DDEEEVTAETVLKTLQSAWQNERLSPEILPHQNDMVECMLGQIQ 421
D +E+ A VLK LQS W+ ER+ I P++ ++ G I+
Sbjct: 553 DLRQELLAFQVLKQLQSIWEQERVPLWIKPYKILVISADSGMIE 596
>AY334562-1|AAQ76829.1| 415|Homo sapiens GRINL1A complex protein
Gcom6 precursor protein.
Length = 415
Score = 30.7 bits (66), Expect = 5.0
Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Frame = +2
Query: 275 ELQFSDDEEEVTAETVLKTLQSAWQNERLSPEI---LPHQNDMVECMLGQIQHMERNINK 445
+LQ + E E++ E + Q E S + + H +DMV C +++ M N+
Sbjct: 286 QLQLLEHETEMSGELTDSDKERYQQLEEASASLRERIRHLDDMVHCQQKKVKQMVEENNE 345
Query: 446 L-SKTDLRTSIH-KMEI-SRIKFIICNYLKTRLNKIEK 550
L S+ D T K E+ +R + C+ L + K EK
Sbjct: 346 LQSRLDYLTETQAKTEVETREIGVGCDLLPRQSRKFEK 383
>AL391069-11|CAH70326.1| 828|Homo sapiens phosphatidylinositol
4-kinase, catalytic, beta polypeptide protein.
Length = 828
Score = 30.7 bits (66), Expect = 5.0
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 290 DDEEEVTAETVLKTLQSAWQNERLSPEILPHQNDMVECMLGQIQ 421
D +E+ A VLK LQS W+ ER+ I P++ ++ G I+
Sbjct: 580 DLRQELLAFQVLKQLQSIWEQERVPLWIKPYKILVISADSGMIE 623
>AL391069-9|CAH70325.1| 801|Homo sapiens phosphatidylinositol
4-kinase, catalytic, beta polypeptide protein.
Length = 801
Score = 30.7 bits (66), Expect = 5.0
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 290 DDEEEVTAETVLKTLQSAWQNERLSPEILPHQNDMVECMLGQIQ 421
D +E+ A VLK LQS W+ ER+ I P++ ++ G I+
Sbjct: 553 DLRQELLAFQVLKQLQSIWEQERVPLWIKPYKILVISADSGMIE 596
>AL391069-8|CAH70324.1| 816|Homo sapiens phosphatidylinositol
4-kinase, catalytic, beta polypeptide protein.
Length = 816
Score = 30.7 bits (66), Expect = 5.0
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 290 DDEEEVTAETVLKTLQSAWQNERLSPEILPHQNDMVECMLGQIQ 421
D +E+ A VLK LQS W+ ER+ I P++ ++ G I+
Sbjct: 568 DLRQELLAFQVLKQLQSIWEQERVPLWIKPYKILVISADSGMIE 611
>AJ011123-1|CAA09496.1| 816|Homo sapiens NPIK-C protein protein.
Length = 816
Score = 30.7 bits (66), Expect = 5.0
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 290 DDEEEVTAETVLKTLQSAWQNERLSPEILPHQNDMVECMLGQIQ 421
D +E+ A VLK LQS W+ ER+ I P++ ++ G I+
Sbjct: 568 DLRQELLAFQVLKQLQSIWEQERVPLWIKPYKILVISADSGMIE 611
>AJ011121-1|CAA09495.1| 816|Homo sapiens NPIK-A protein protein.
Length = 816
Score = 30.7 bits (66), Expect = 5.0
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 290 DDEEEVTAETVLKTLQSAWQNERLSPEILPHQNDMVECMLGQIQ 421
D +E+ A VLK LQS W+ ER+ I P++ ++ G I+
Sbjct: 568 DLRQELLAFQVLKQLQSIWEQERVPLWIKPYKILVISADSGMIE 611
>AB005910-1|BAA21661.1| 828|Homo sapiens phosphatidylinositol
4-kinase protein.
Length = 828
Score = 30.7 bits (66), Expect = 5.0
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 290 DDEEEVTAETVLKTLQSAWQNERLSPEILPHQNDMVECMLGQIQ 421
D +E+ A VLK LQS W+ ER+ I P++ ++ G I+
Sbjct: 580 DLRQELLAFQVLKQLQSIWEQERVPLWIKPYKILVISADSGMIE 623
>AY353058-1|AAQ76834.1| 438|Homo sapiens GRINL1A combined protein
Gcom9 precursor protein.
Length = 438
Score = 29.9 bits (64), Expect = 8.7
Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 6/105 (5%)
Frame = +2
Query: 275 ELQFSDDEEEVTAETVLKTLQSAWQNERLSPEI---LPHQNDMVECMLGQIQHMERNINK 445
+LQ + E E++ E + Q E S + + H +DMV C +++ M N+
Sbjct: 317 QLQLLEHETEMSGELTDSDKERYQQLEEASASLRERIRHLDDMVHCQQKKVKQMVEENNE 376
Query: 446 L-SKTDLRTSIH-KMEI-SRIKFIICNYLKTRLNKIEKYCIPILN 571
L S+ D T K E+ +R + C+ L ++ + + +P N
Sbjct: 377 LQSRLDYLTETQAKTEVETREIGVGCDLLPSQTGRTREIVMPSRN 421
>AY237639-1|AAP75897.1| 438|Homo sapiens GRINL1A upstream protein 2
precursor protein.
Length = 438
Score = 29.9 bits (64), Expect = 8.7
Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 6/105 (5%)
Frame = +2
Query: 275 ELQFSDDEEEVTAETVLKTLQSAWQNERLSPEI---LPHQNDMVECMLGQIQHMERNINK 445
+LQ + E E++ E + Q E S + + H +DMV C +++ M N+
Sbjct: 317 QLQLLEHETEMSGELTDSDKERYQQLEEASASLRERIRHLDDMVHCQQKKVKQMVEENNE 376
Query: 446 L-SKTDLRTSIH-KMEI-SRIKFIICNYLKTRLNKIEKYCIPILN 571
L S+ D T K E+ +R + C+ L ++ + + +P N
Sbjct: 377 LQSRLDYLTETQAKTEVETREIGVGCDLLPSQTGRTREIVMPSRN 421
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,100,895
Number of Sequences: 237096
Number of extensions: 1259292
Number of successful extensions: 2394
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2362
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2391
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7647512560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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