Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22b02
         (671 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-3913|AAF56561.1|  228|Drosophila melanogaster CG14549-P...   128   9e-30
DQ352451-1|ABD22987.1| 3790|Drosophila melanogaster Nipped-A pro...    32   0.82 
AY142217-1|AAN52145.1| 3803|Drosophila melanogaster transformati...    32   0.82 
AE013599-60|AAF57342.2| 3805|Drosophila melanogaster CG33554-PA,...    32   0.82 
AE013599-59|ABI31023.1| 3628|Drosophila melanogaster CG33554-PC,...    32   0.82 
AE013599-58|ABI31022.1| 3400|Drosophila melanogaster CG33554-PB,...    32   0.82 

>AE014297-3913|AAF56561.1|  228|Drosophila melanogaster CG14549-PA
           protein.
          Length = 228

 Score =  128 bits (308), Expect = 9e-30
 Identities = 57/125 (45%), Positives = 84/125 (67%)
 Frame = +2

Query: 290 DDEEEVTAETVLKTLQSAWQNERLSPEILPHQNDMVECMLGQIQHMERNINKLSKTDLRT 469
           DD E++TA+ VL+ +++AW NE  +PEILP Q DM+E M+ Q+ HME  +  L K D R 
Sbjct: 28  DDMEQITAQKVLEIIETAWINEMCAPEILPSQTDMLELMVSQVAHMEEQMRDLDKNDFRA 87

Query: 470 SIHKMEISRIKFIICNYLKTRLNKIEKYCIPILNQERQRIETDTNYLTPSEYKYAQEYVL 649
            +H ME+ R+++I+ +YL+ RL KIE +   ILNQE  R E D   L+P E K+AQE+  
Sbjct: 88  VVHSMELERVRYIMASYLRCRLQKIETFTQHILNQEESR-EPDDKRLSPEETKFAQEFAS 146

Query: 650 NMENH 664
           N++ +
Sbjct: 147 NVDEY 151


>DQ352451-1|ABD22987.1| 3790|Drosophila melanogaster Nipped-A protein.
          Length = 3790

 Score = 31.9 bits (69), Expect = 0.82
 Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
 Frame = +2

Query: 350  NERLSPEILPHQNDMVECMLGQIQHMERNINKLSKTDLRTSIHKMEISRIKFIICNYLKT 529
            NE+LS +IL H + ++E  + + +    N+N  + +       K+ I    F    Y+  
Sbjct: 1412 NEKLSEQILQHCSKIMEIFVSEYKSTSPNVNFFASSKGGEYEQKIVILIEMFF---YISA 1468

Query: 530  RLNKIEKYCIPILNQERQ-RIETDTNY 607
             +  IEK C  +L  E+   IE  + Y
Sbjct: 1469 SVKYIEKLCQLVLKTEKNLMIEASSPY 1495


>AY142217-1|AAN52145.1| 3803|Drosophila melanogaster
            transformation/transcription domain-associated protein
            protein.
          Length = 3803

 Score = 31.9 bits (69), Expect = 0.82
 Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
 Frame = +2

Query: 350  NERLSPEILPHQNDMVECMLGQIQHMERNINKLSKTDLRTSIHKMEISRIKFIICNYLKT 529
            NE+LS +IL H + ++E  + + +    N+N  + +       K+ I    F    Y+  
Sbjct: 1474 NEKLSEQILQHCSKIMEIFVSEYKSTSPNVNFFASSKGGEYEQKIVILIEMFF---YISA 1530

Query: 530  RLNKIEKYCIPILNQERQ-RIETDTNY 607
             +  IEK C  +L  E+   IE  + Y
Sbjct: 1531 SVKYIEKLCQLVLKTEKNLMIEASSPY 1557


>AE013599-60|AAF57342.2| 3805|Drosophila melanogaster CG33554-PA,
            isoform A protein.
          Length = 3805

 Score = 31.9 bits (69), Expect = 0.82
 Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
 Frame = +2

Query: 350  NERLSPEILPHQNDMVECMLGQIQHMERNINKLSKTDLRTSIHKMEISRIKFIICNYLKT 529
            NE+LS +IL H + ++E  + + +    N+N  + +       K+ I    F    Y+  
Sbjct: 1476 NEKLSEQILQHCSKIMEIFVSEYKSTSPNVNFFASSKGGEYEQKIVILIEMFF---YISA 1532

Query: 530  RLNKIEKYCIPILNQERQ-RIETDTNY 607
             +  IEK C  +L  E+   IE  + Y
Sbjct: 1533 SVKYIEKLCQLVLKTEKNLMIEASSPY 1559


>AE013599-59|ABI31023.1| 3628|Drosophila melanogaster CG33554-PC,
            isoform C protein.
          Length = 3628

 Score = 31.9 bits (69), Expect = 0.82
 Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
 Frame = +2

Query: 350  NERLSPEILPHQNDMVECMLGQIQHMERNINKLSKTDLRTSIHKMEISRIKFIICNYLKT 529
            NE+LS +IL H + ++E  + + +    N+N  + +       K+ I    F    Y+  
Sbjct: 1320 NEKLSEQILQHCSKIMEIFVSEYKSTSPNVNFFASSKGGEYEQKIVILIEMFF---YISA 1376

Query: 530  RLNKIEKYCIPILNQERQ-RIETDTNY 607
             +  IEK C  +L  E+   IE  + Y
Sbjct: 1377 SVKYIEKLCQLVLKTEKNLMIEASSPY 1403


>AE013599-58|ABI31022.1| 3400|Drosophila melanogaster CG33554-PB,
            isoform B protein.
          Length = 3400

 Score = 31.9 bits (69), Expect = 0.82
 Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
 Frame = +2

Query: 350  NERLSPEILPHQNDMVECMLGQIQHMERNINKLSKTDLRTSIHKMEISRIKFIICNYLKT 529
            NE+LS +IL H + ++E  + + +    N+N  + +       K+ I    F    Y+  
Sbjct: 1150 NEKLSEQILQHCSKIMEIFVSEYKSTSPNVNFFASSKGGEYEQKIVILIEMFF---YISA 1206

Query: 530  RLNKIEKYCIPILNQERQ-RIETDTNY 607
             +  IEK C  +L  E+   IE  + Y
Sbjct: 1207 SVKYIEKLCQLVLKTEKNLMIEASSPY 1233


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,655,235
Number of Sequences: 53049
Number of extensions: 386931
Number of successful extensions: 879
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 878
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2910007350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)