Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22a24
         (592 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75547-11|CAA99905.4|  394|Caenorhabditis elegans Hypothetical p...    31   0.61 
U42847-4|AAF23186.1| 1073|Caenorhabditis elegans Immunoglobulin-...    28   5.7  
Z81098-9|CAB03185.3|  364|Caenorhabditis elegans Hypothetical pr...    27   10.0 
Z81079-9|CAB03085.3|  364|Caenorhabditis elegans Hypothetical pr...    27   10.0 
Z77662-2|CAB01200.1|  181|Caenorhabditis elegans Hypothetical pr...    27   10.0 
AF067943-3|AAC17664.1|  266|Caenorhabditis elegans Hypothetical ...    27   10.0 

>Z75547-11|CAA99905.4|  394|Caenorhabditis elegans Hypothetical
           protein R11D1.10a protein.
          Length = 394

 Score = 31.1 bits (67), Expect = 0.61
 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
 Frame = +1

Query: 370 ELGRELGFYWSTVNECLELNETSD---AKLSEKIIAQLLKVKELIDTFPPNNSEDH 528
           ++ +E+G +W   NE L ++E  D     L E+   ++L   E  +  PP  SE +
Sbjct: 312 KITKEIGGFWDRRNEKLSVDEDEDEDEKSLDEETFKKILHEAENSEDLPPQTSESN 367


>U42847-4|AAF23186.1| 1073|Caenorhabditis elegans
           Immunoglobulin-like cell adhesionmolecule family protein
           1 protein.
          Length = 1073

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = +1

Query: 412 ECLELNETSDAKLSEKIIAQLLKVKELIDTFPPNNSEDHDILGMADAV 555
           EC   NE  +     K++ Q +    + ++  PN  ED DIL    AV
Sbjct: 311 ECRSTNELGEGTAVLKMVVQHIPRINVPESISPNEMEDIDILCEVSAV 358


>Z81098-9|CAB03185.3|  364|Caenorhabditis elegans Hypothetical
           protein K07A12.5 protein.
          Length = 364

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 8/70 (11%)
 Frame = +1

Query: 394 YWSTVNE--CLELNETSDAKLS---EKIIAQLL---KVKELIDTFPPNNSEDHDILGMAD 549
           YW   +E   + L++  + K +   EK+I  +    KVK    T PP+N+ +  +     
Sbjct: 203 YWMAKDEEEDMTLDDDPEGKYTVTAEKLIETMTAGGKVKHAGITEPPSNTANTIMSESLA 262

Query: 550 AVRAQYKKAC 579
           ++ A+YKK+C
Sbjct: 263 SINARYKKSC 272


>Z81079-9|CAB03085.3|  364|Caenorhabditis elegans Hypothetical
           protein K07A12.5 protein.
          Length = 364

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 8/70 (11%)
 Frame = +1

Query: 394 YWSTVNE--CLELNETSDAKLS---EKIIAQLL---KVKELIDTFPPNNSEDHDILGMAD 549
           YW   +E   + L++  + K +   EK+I  +    KVK    T PP+N+ +  +     
Sbjct: 203 YWMAKDEEEDMTLDDDPEGKYTVTAEKLIETMTAGGKVKHAGITEPPSNTANTIMSESLA 262

Query: 550 AVRAQYKKAC 579
           ++ A+YKK+C
Sbjct: 263 SINARYKKSC 272


>Z77662-2|CAB01200.1|  181|Caenorhabditis elegans Hypothetical
           protein F47B8.2 protein.
          Length = 181

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 11/46 (23%), Positives = 25/46 (54%)
 Frame = -3

Query: 539 PSMSWSSELLGGKVSISSLTLSSWAIIFSDNFASDVSFSSRHSFTV 402
           P++ WS  ++   V ++ L    W ++F+   AS ++ +++  F V
Sbjct: 72  PALKWSQRVVAIAVVLAVLQFMIWPVMFASFTASGLADTNKTMFEV 117


>AF067943-3|AAC17664.1|  266|Caenorhabditis elegans Hypothetical
           protein F59B1.4 protein.
          Length = 266

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
 Frame = -3

Query: 221 ISRHSLATFWWSPFSIFVSG*VIY----VLNLYYQCASNKFFVFKLNSSDDFLFCVILV* 54
           I+ + L  FW +   IF+    +Y    +L +  +  + K  +F  ++   ++FCVIL  
Sbjct: 71  IANNLLNAFWSAAIWIFLFAGFVYFTFMILVVRLKIVARKGKIFDFSNRSYYIFCVILAL 130

Query: 53  Y 51
           Y
Sbjct: 131 Y 131


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,138,556
Number of Sequences: 27780
Number of extensions: 198677
Number of successful extensions: 555
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 542
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 555
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)