Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22a16
         (687 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0337 - 22454281-22456399,22458520-22459388                       30   2.0  
07_03_0820 - 21749477-21749866,21751192-21751590                       30   2.0  
11_06_0347 + 22555087-22555943,22556638-22558783                       29   3.5  
06_01_0838 - 6360232-6360460,6360571-6360719,6360825-6360933,636...    29   3.5  
11_03_0128 - 10437407-10438049,10438097-10438272                       29   4.6  
07_01_0089 - 687064-687543                                             28   6.0  
05_03_0321 + 12363355-12363614,12363689-12364145,12364165-12365718     28   8.0  
01_06_1416 - 37174913-37175006,37175299-37175441,37175932-371760...    28   8.0  

>11_06_0337 - 22454281-22456399,22458520-22459388
          Length = 995

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 12/43 (27%), Positives = 23/43 (53%)
 Frame = -1

Query: 612 GALKQCAVRYIILLDLVQLTQRAHFSSIVASHGQTDIPKARPR 484
           G +K C +  ++L  +V  +   +F +++ SH QT  P  + R
Sbjct: 508 GKVKSCQIHDMVLEYIVSKSGEENFITVIGSHWQTPFPSYKVR 550


>07_03_0820 - 21749477-21749866,21751192-21751590
          Length = 262

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 17/31 (54%), Positives = 18/31 (58%)
 Frame = -2

Query: 458 LAFRLTLNGLEPTP*PRNRTKPDLILEELIP 366
           L FR+ L GL P P  RNR K D   EEL P
Sbjct: 219 LPFRVLLKGLLPHPLLRNRVKQD--FEELFP 247


>11_06_0347 + 22555087-22555943,22556638-22558783
          Length = 1000

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 12/43 (27%), Positives = 23/43 (53%)
 Frame = -1

Query: 612 GALKQCAVRYIILLDLVQLTQRAHFSSIVASHGQTDIPKARPR 484
           G +K C +  ++L  +V  +   +F +++ SH QT  P  + R
Sbjct: 504 GKVKSCQIHDMVLEYIVSKSGDENFITVIGSHWQTPFPSYKVR 546


>06_01_0838 -
           6360232-6360460,6360571-6360719,6360825-6360933,
           6361446-6362276,6362865-6362969,6363084-6363180,
           6363303-6363341,6363435-6363477
          Length = 533

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -1

Query: 399 KTRFDPGGADTSGQVCRTCSRTNRITR 319
           K  +D  G DTSG VCR+ S  N I +
Sbjct: 8   KKGWDSNGMDTSGSVCRSSSDINYINQ 34


>11_03_0128 - 10437407-10438049,10438097-10438272
          Length = 272

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 15/40 (37%), Positives = 18/40 (45%)
 Frame = -1

Query: 456 CFSANIEWP*ANALAKKSHKTRFDPGGADTSGQVCRTCSR 337
           C +A I  P     A++ H  R     A TS   CRTC R
Sbjct: 109 CPAAGIHRPDDGHRARQRHLPRRSRSTASTSSTTCRTCCR 148


>07_01_0089 - 687064-687543
          Length = 159

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 25/111 (22%), Positives = 39/111 (35%)
 Frame = +2

Query: 281 PVRVRRARPSDVPRVIRFVREHVRQTWPEVSAPPGSNLVLCDFLARALAQGHSMLAEKQE 460
           P  +RR    +  RV+ FV   VR    ++    G  +     L      G++ +    E
Sbjct: 40  PAALRRFLADE--RVV-FVGYGVRSDCRKLEEQHGLEVARTVELRSLAGMGNTSMQRMAE 96

Query: 461 IRRGWSQIRGLALGISVCPWDATMLEKWARCVSCTKSRRMIYLTAHCLRAP 613
              GW  +      +    WDA  L K     +C  +     L  H + AP
Sbjct: 97  EHLGWDGVTTKPRKVGTSRWDARRLSKEQVQYACVDAYLSFRLAVHVVAAP 147


>05_03_0321 + 12363355-12363614,12363689-12364145,12364165-12365718
          Length = 756

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 24/73 (32%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
 Frame = -1

Query: 516 GQTDIPKARP--RICDQPLLISCFSANIEWP*ANALAKKSHKTRFDPGGADTSGQVCRTC 343
           G T  P AR   R  D  LLI     + +WP     A  SH T    GG   SG  C   
Sbjct: 224 GMTPDPSARHAHRQGDLDLLIKRLDDHEKWPQGTVKALDSHVTCEVYGGTGHSGNDCPE- 282

Query: 342 SRTNRITRGTSDG 304
           +R   +  G ++G
Sbjct: 283 TREEAMYMGNNNG 295


>01_06_1416 -
           37174913-37175006,37175299-37175441,37175932-37176027,
           37177125-37177364,37177456-37177812,37178020-37178097,
           37178387-37178434,37179406-37179675,37179954-37180054,
           37180452-37180605
          Length = 526

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
 Frame = +1

Query: 424 GSRPFNVSRKARNQEGLVTNPRSRFGYISLSVGRDDAGEV--GSLRELHQIEEDDISDGA 597
           G RP ++ +    Q   +T  +   G  SL    + A E     L++LHQ   D ++ G 
Sbjct: 328 GFRPSDLLKILIQQLDPLTE-QQMLGIYSLQQSSEQAEEALAQGLQQLHQSLADTVAAGT 386

Query: 598 LLEGPGL 618
           L +GPG+
Sbjct: 387 LNDGPGV 393


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,421,395
Number of Sequences: 37544
Number of extensions: 393024
Number of successful extensions: 1085
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1085
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1744894544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)