Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte22a16
(687 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003144-4|AAB54197.2| 164|Caenorhabditis elegans Hypothetical ... 28 7.2
Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical p... 27 9.5
Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical p... 27 9.5
AL132951-13|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical... 27 9.5
AL132951-12|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical... 27 9.5
AL132951-11|CAN86614.1| 502|Caenorhabditis elegans Hypothetical... 27 9.5
AF283324-1|AAG18576.1| 502|Caenorhabditis elegans synaptojanin ... 27 9.5
AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin ... 27 9.5
AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin ... 27 9.5
>AF003144-4|AAB54197.2| 164|Caenorhabditis elegans Hypothetical
protein C55C2.1 protein.
Length = 164
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -3
Query: 352 SDMFTDKSNYPRHVRRASATHPHR 281
S F DKSN H++ S T PH+
Sbjct: 114 SKRFADKSNLRAHIQTHSGTKPHK 137
>Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical
protein JC8.10b protein.
Length = 1119
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/63 (23%), Positives = 28/63 (44%)
Frame = +3
Query: 78 EYILKYSSSTATPCRHCQDFSRSYQVEISSEEYKEPSAASVVMSGVIQIQPKVILILNRL 257
E + + + T C C D + + Q I + + A + +G + ++ +V IL L
Sbjct: 365 EIVKRQTGVIRTNCLDCLDRTNAVQTAIGLQMSHDQVAFLNLNAGKVNVEQRVEEILRDL 424
Query: 258 WYK 266
W K
Sbjct: 425 WQK 427
>Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical
protein JC8.10a protein.
Length = 1113
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/63 (23%), Positives = 28/63 (44%)
Frame = +3
Query: 78 EYILKYSSSTATPCRHCQDFSRSYQVEISSEEYKEPSAASVVMSGVIQIQPKVILILNRL 257
E + + + T C C D + + Q I + + A + +G + ++ +V IL L
Sbjct: 365 EIVKRQTGVIRTNCLDCLDRTNAVQTAIGLQMSHDQVAFLNLNAGKVNVEQRVEEILRDL 424
Query: 258 WYK 266
W K
Sbjct: 425 WQK 427
>AL132951-13|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical
protein JC8.10b protein.
Length = 1119
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/63 (23%), Positives = 28/63 (44%)
Frame = +3
Query: 78 EYILKYSSSTATPCRHCQDFSRSYQVEISSEEYKEPSAASVVMSGVIQIQPKVILILNRL 257
E + + + T C C D + + Q I + + A + +G + ++ +V IL L
Sbjct: 365 EIVKRQTGVIRTNCLDCLDRTNAVQTAIGLQMSHDQVAFLNLNAGKVNVEQRVEEILRDL 424
Query: 258 WYK 266
W K
Sbjct: 425 WQK 427
>AL132951-12|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical
protein JC8.10a protein.
Length = 1113
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/63 (23%), Positives = 28/63 (44%)
Frame = +3
Query: 78 EYILKYSSSTATPCRHCQDFSRSYQVEISSEEYKEPSAASVVMSGVIQIQPKVILILNRL 257
E + + + T C C D + + Q I + + A + +G + ++ +V IL L
Sbjct: 365 EIVKRQTGVIRTNCLDCLDRTNAVQTAIGLQMSHDQVAFLNLNAGKVNVEQRVEEILRDL 424
Query: 258 WYK 266
W K
Sbjct: 425 WQK 427
>AL132951-11|CAN86614.1| 502|Caenorhabditis elegans Hypothetical
protein JC8.10c protein.
Length = 502
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/63 (23%), Positives = 28/63 (44%)
Frame = +3
Query: 78 EYILKYSSSTATPCRHCQDFSRSYQVEISSEEYKEPSAASVVMSGVIQIQPKVILILNRL 257
E + + + T C C D + + Q I + + A + +G + ++ +V IL L
Sbjct: 365 EIVKRQTGVIRTNCLDCLDRTNAVQTAIGLQMSHDQVAFLNLNAGKVNVEQRVEEILRDL 424
Query: 258 WYK 266
W K
Sbjct: 425 WQK 427
>AF283324-1|AAG18576.1| 502|Caenorhabditis elegans synaptojanin
UNC-26C protein.
Length = 502
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/63 (23%), Positives = 28/63 (44%)
Frame = +3
Query: 78 EYILKYSSSTATPCRHCQDFSRSYQVEISSEEYKEPSAASVVMSGVIQIQPKVILILNRL 257
E + + + T C C D + + Q I + + A + +G + ++ +V IL L
Sbjct: 365 EIVKRQTGVIRTNCLDCLDRTNAVQTAIGLQMSHDQVAFLNLNAGKVNVEQRVEEILRDL 424
Query: 258 WYK 266
W K
Sbjct: 425 WQK 427
>AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin
UNC-26B protein.
Length = 1113
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/63 (23%), Positives = 28/63 (44%)
Frame = +3
Query: 78 EYILKYSSSTATPCRHCQDFSRSYQVEISSEEYKEPSAASVVMSGVIQIQPKVILILNRL 257
E + + + T C C D + + Q I + + A + +G + ++ +V IL L
Sbjct: 365 EIVKRQTGVIRTNCLDCLDRTNAVQTAIGLQMSHDQVAFLNLNAGKVNVEQRVEEILRDL 424
Query: 258 WYK 266
W K
Sbjct: 425 WQK 427
>AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin
UNC-26A protein.
Length = 1119
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/63 (23%), Positives = 28/63 (44%)
Frame = +3
Query: 78 EYILKYSSSTATPCRHCQDFSRSYQVEISSEEYKEPSAASVVMSGVIQIQPKVILILNRL 257
E + + + T C C D + + Q I + + A + +G + ++ +V IL L
Sbjct: 365 EIVKRQTGVIRTNCLDCLDRTNAVQTAIGLQMSHDQVAFLNLNAGKVNVEQRVEEILRDL 424
Query: 258 WYK 266
W K
Sbjct: 425 WQK 427
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,237,589
Number of Sequences: 27780
Number of extensions: 316667
Number of successful extensions: 881
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 844
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 881
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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