Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22a11
         (672 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81575-10|CAB04640.1|  338|Caenorhabditis elegans Hypothetical p...    29   2.3  
AF016672-5|AAB66120.1|  951|Caenorhabditis elegans Hypothetical ...    29   3.0  
AF016672-4|AAD47126.1|  968|Caenorhabditis elegans Hypothetical ...    29   3.0  
AC006742-1|AAF60499.2| 1393|Caenorhabditis elegans Hypothetical ...    28   5.3  
Z66494-5|CAA91259.1|  473|Caenorhabditis elegans Hypothetical pr...    28   6.9  
U12965-9|AAA20605.3|  522|Caenorhabditis elegans Hypothetical pr...    28   6.9  

>Z81575-10|CAB04640.1|  338|Caenorhabditis elegans Hypothetical
           protein R08H2.13 protein.
          Length = 338

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 18/46 (39%), Positives = 26/46 (56%)
 Frame = +3

Query: 363 LELTYQAMNMLISEYLLRLEFNYTLSVFVSEIPLANMVFGFAKTLM 500
           LELTY A  +    + L + FN+ L + +SE+P    +FG  K LM
Sbjct: 7   LELTYYAETI---GFCLSISFNFILLLLISEMP--KKIFGSYKYLM 47


>AF016672-5|AAB66120.1|  951|Caenorhabditis elegans Hypothetical
           protein F56D12.6b protein.
          Length = 951

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +3

Query: 141 EEFNLNVDRAS-IEEQNETKQSDSAENFQKFMYNLF 245
           EE+   VD+   + E  ETK SDS + FQ F  +L+
Sbjct: 160 EEYKSYVDKYELVREDFETKMSDSCKKFQTFDRSLY 195


>AF016672-4|AAD47126.1|  968|Caenorhabditis elegans Hypothetical
           protein F56D12.6a protein.
          Length = 968

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +3

Query: 141 EEFNLNVDRAS-IEEQNETKQSDSAENFQKFMYNLF 245
           EE+   VD+   + E  ETK SDS + FQ F  +L+
Sbjct: 177 EEYKSYVDKYELVREDFETKMSDSCKKFQTFDRSLY 212


>AC006742-1|AAF60499.2| 1393|Caenorhabditis elegans Hypothetical
           protein Y38C1AB.4 protein.
          Length = 1393

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +3

Query: 159 VDRASIEEQNETKQSDSA-ENFQKFMYNLFERNGVIN 266
           VDR   EE +E +  D+  E ++K   ++FE+NGV N
Sbjct: 376 VDRFVEEEVDEKEDIDAIFEKYRKVRKDIFEKNGVEN 412


>Z66494-5|CAA91259.1|  473|Caenorhabditis elegans Hypothetical
           protein C34C6.5a protein.
          Length = 473

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = +1

Query: 136 KWKSSI*MLIELRLKNKMKQSKAIQRKIFKSSCT 237
           +W SS+  +  L +K K+K  +++Q    K +CT
Sbjct: 14  QWYSSLLTIFSLTIKRKLKTIRSMQDSTSKCTCT 47


>U12965-9|AAA20605.3|  522|Caenorhabditis elegans Hypothetical
           protein F23F12.3 protein.
          Length = 522

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
 Frame = -2

Query: 614 INDSRCVFRITFYTQIVYNGPD---IILFQSEARVIITAMVHKC 492
           I   + VF  TF+  + YN PD   I+ FQ  AR++ T +   C
Sbjct: 176 IEPEQRVFLRTFFNWVRYNKPDLGVIMGFQGYARLVFTLVCFIC 219


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,123,185
Number of Sequences: 27780
Number of extensions: 344688
Number of successful extensions: 826
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 826
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)