Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22a05
         (418 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83113-5|CAB05547.1|  185|Caenorhabditis elegans Hypothetical pr...    99   1e-21
Z79757-9|CAB02123.3|  327|Caenorhabditis elegans Hypothetical pr...    29   1.4  
Z69904-1|CAA93777.1|  420|Caenorhabditis elegans Hypothetical pr...    27   5.5  
U40415-6|AAP68933.1|  329|Caenorhabditis elegans Homolog of yeas...    27   5.5  

>Z83113-5|CAB05547.1|  185|Caenorhabditis elegans Hypothetical
           protein K08H10.9 protein.
          Length = 185

 Score = 98.7 bits (235), Expect = 1e-21
 Identities = 44/78 (56%), Positives = 58/78 (74%)
 Frame = +3

Query: 6   KQIDNLRTNHQGVYVLQDNAFRFLTNFSNGHQYLEYAPRYVAYTCGLIRGGLANLCINSI 185
           KQ+DNLRTNHQGVYV+QD  F  L +F  G QY++ +  ++A+ CGL+RG LA L I +I
Sbjct: 106 KQVDNLRTNHQGVYVVQDGRFTTLRSFPEGDQYVKESGYFLAFPCGLLRGALAGLNIRAI 165

Query: 186 VTAEVQSMPSCKFHIHVQ 239
           VT  ++S+PS KFHI VQ
Sbjct: 166 VTPTIESVPSVKFHIQVQ 183


>Z79757-9|CAB02123.3|  327|Caenorhabditis elegans Hypothetical
           protein F55B12.2 protein.
          Length = 327

 Score = 29.1 bits (62), Expect = 1.4
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = +3

Query: 51  LQDNAFRFLTNFSNGHQYLEYAPRYVAYTCGLIRGGLANLCIN 179
           L+DN   F+  + N    L  AP+Y   +CG IR  ++ L IN
Sbjct: 53  LRDNHLDFIQPYVNIRSDLFIAPKYKILSCG-IRKSMSQLLIN 94


>Z69904-1|CAA93777.1|  420|Caenorhabditis elegans Hypothetical
           protein ZK20.1 protein.
          Length = 420

 Score = 27.1 bits (57), Expect = 5.5
 Identities = 18/67 (26%), Positives = 31/67 (46%)
 Frame = -3

Query: 281 KQCKQSKSRFVLCSLNVYMKFT*RHRLNFCCDNTVNTEISQSTSNEPTSVSNISRSIFQV 102
           K CK ++ RF+    ++   F  R  +    DNTV+  +  STS   T+   + R   +V
Sbjct: 252 KSCKTTECRFIEDG-DIVSSFFDRPSIRIQSDNTVSLRLPLSTSLTTTNGKELFRIQTEV 310

Query: 101 LMTIRKI 81
            + +  I
Sbjct: 311 ELNLEDI 317


>U40415-6|AAP68933.1|  329|Caenorhabditis elegans Homolog of yeast
           longevity geneprotein 2 protein.
          Length = 329

 Score = 27.1 bits (57), Expect = 5.5
 Identities = 19/70 (27%), Positives = 31/70 (44%)
 Frame = +1

Query: 16  IIFVQTTKEFMYFKIMHSVF*QIFLMVISTWNMLLDMLLTLVGSFEVDWLISVLTVLSQQ 195
           I+F+   +   +  ++H       + V  T NM+    L LV    VD LI V  +L  +
Sbjct: 152 ILFLDAKRSDFWQMLVHHFITLALIGVSWTMNMVRVGTLILVSHDAVDILIDVGKILRYE 211

Query: 196 KFSLCLHVNF 225
           +F   L + F
Sbjct: 212 QFETALTICF 221


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,213,673
Number of Sequences: 27780
Number of extensions: 139330
Number of successful extensions: 360
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 360
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 683806592
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)