Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22a01
         (683 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF067612-6|AAU05568.1|  470|Caenorhabditis elegans Egg laying de...    31   1.0  
AF067612-4|AAM98010.1|  749|Caenorhabditis elegans Egg laying de...    31   1.0  
AF067612-3|AAU05567.1|  743|Caenorhabditis elegans Egg laying de...    31   1.0  
AF067612-2|AAD36953.1|  737|Caenorhabditis elegans Egg laying de...    31   1.0  
AF067612-1|AAD36954.1|  780|Caenorhabditis elegans Egg laying de...    31   1.0  
AL110498-3|CAB54470.1|  846|Caenorhabditis elegans Hypothetical ...    29   3.1  
Z77659-5|CAB01168.1|  953|Caenorhabditis elegans Hypothetical pr...    28   5.4  
AL117195-12|CAB60765.1|  425|Caenorhabditis elegans Hypothetical...    28   5.4  
Z82052-8|CAD89751.2|  325|Caenorhabditis elegans Hypothetical pr...    28   7.1  
Z68012-3|CAA92017.1|  269|Caenorhabditis elegans Hypothetical pr...    28   7.1  

>AF067612-6|AAU05568.1|  470|Caenorhabditis elegans Egg laying
           defective protein 4,isoform f protein.
          Length = 470

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = +2

Query: 509 KLAAVTYFKYYGPCRTIVRQHQDAHALYFIVSGEVTVTQMVFDE 640
           K+A V    YY     I+RQ +   A + I SG+V VTQ +  E
Sbjct: 20  KMADVMDQDYYDGGHYIIRQGEKGDAFFVINSGQVKVTQQIEGE 63


>AF067612-4|AAM98010.1|  749|Caenorhabditis elegans Egg laying
           defective protein 4,isoform c protein.
          Length = 749

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = +2

Query: 509 KLAAVTYFKYYGPCRTIVRQHQDAHALYFIVSGEVTVTQMVFDE 640
           K+A V    YY     I+RQ +   A + I SG+V VTQ +  E
Sbjct: 299 KMADVMDQDYYDGGHYIIRQGEKGDAFFVINSGQVKVTQQIEGE 342


>AF067612-3|AAU05567.1|  743|Caenorhabditis elegans Egg laying
           defective protein 4,isoform e protein.
          Length = 743

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = +2

Query: 509 KLAAVTYFKYYGPCRTIVRQHQDAHALYFIVSGEVTVTQMVFDE 640
           K+A V    YY     I+RQ +   A + I SG+V VTQ +  E
Sbjct: 293 KMADVMDQDYYDGGHYIIRQGEKGDAFFVINSGQVKVTQQIEGE 336


>AF067612-2|AAD36953.1|  737|Caenorhabditis elegans Egg laying
           defective protein 4,isoform b protein.
          Length = 737

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = +2

Query: 509 KLAAVTYFKYYGPCRTIVRQHQDAHALYFIVSGEVTVTQMVFDE 640
           K+A V    YY     I+RQ +   A + I SG+V VTQ +  E
Sbjct: 287 KMADVMDQDYYDGGHYIIRQGEKGDAFFVINSGQVKVTQQIEGE 330


>AF067612-1|AAD36954.1|  780|Caenorhabditis elegans Egg laying
           defective protein 4,isoform a protein.
          Length = 780

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = +2

Query: 509 KLAAVTYFKYYGPCRTIVRQHQDAHALYFIVSGEVTVTQMVFDE 640
           K+A V    YY     I+RQ +   A + I SG+V VTQ +  E
Sbjct: 330 KMADVMDQDYYDGGHYIIRQGEKGDAFFVINSGQVKVTQQIEGE 373


>AL110498-3|CAB54470.1|  846|Caenorhabditis elegans Hypothetical
           protein Y64G10A.6 protein.
          Length = 846

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 4/79 (5%)
 Frame = +2

Query: 446 YIYRIIGGLKCFKRYPNHVKKK----LAAVTYFKYYGPCRTIVRQHQDAHALYFIVSGEV 613
           +I  +  GLKC+K++ N  K      L     F + G    I++Q      +Y   S + 
Sbjct: 431 FILSVCAGLKCYKKFNNKKKASNIHLLNENPAFSHSGSIPLILKQSISVLIVYSHDSAQH 490

Query: 614 TVTQMVFDELLQQYVSIEI 670
               + F ELL+   ++ +
Sbjct: 491 EAAVLAFAELLRDVFNLNV 509


>Z77659-5|CAB01168.1|  953|Caenorhabditis elegans Hypothetical
           protein F23B12.7 protein.
          Length = 953

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 14/55 (25%), Positives = 25/55 (45%)
 Frame = +2

Query: 302 ENYEGLENVKRRVQQAMRGKPKKKQLLSINDKALLNKPANERTEQEKKYIYRIIG 466
           +N    E +  + +       KKKQ  +   K + +KPAN     +K+   +I+G
Sbjct: 34  DNLASAEKIMAQFESGAVHTNKKKQAQNGAAKPVAHKPANPENSNQKRQFKKILG 88


>AL117195-12|CAB60765.1|  425|Caenorhabditis elegans Hypothetical
           protein Y57A10A.19 protein.
          Length = 425

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 11/51 (21%), Positives = 29/51 (56%)
 Frame = +2

Query: 293 EDSENYEGLENVKRRVQQAMRGKPKKKQLLSINDKALLNKPANERTEQEKK 445
           +D +  E  + +K   ++  + + K+++LL+++DK    +PA    E++ +
Sbjct: 211 KDRKKKEKKQKLKEMEKRREKLRQKERELLAVSDKVKKEEPAESSDEEDSR 261


>Z82052-8|CAD89751.2|  325|Caenorhabditis elegans Hypothetical
           protein T25E12.13 protein.
          Length = 325

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
 Frame = -2

Query: 568 LTYDSPTRAVVFEVRHCR*FLLYVIRI-------TLKTFQAANNSIYVFFLLFCSFVGGF 410
           L Y +P   V F +     F+L+V+R         ++ F A N ++Y+FF +  SF+  F
Sbjct: 145 LNYITPLN-VFFVLLDVAAFMLHVLRQYGVLNTEKVQVFIACNEALYMFFNIVISFLTPF 203

Query: 409 V*QRFIINRQQLFFLWLPTHGLLDSSLY 326
           +    +I+ ++   L  P H  L + ++
Sbjct: 204 IYIPIMIDIRKNRHLHSPQHMFLHNYIF 231


>Z68012-3|CAA92017.1|  269|Caenorhabditis elegans Hypothetical
           protein T24D5.3 protein.
          Length = 269

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 13/49 (26%), Positives = 28/49 (57%)
 Frame = +2

Query: 281 HWLIEDSENYEGLENVKRRVQQAMRGKPKKKQLLSINDKALLNKPANER 427
           +WL E  E +E +EN++++  + M  K   ++  +++ K +L    N+R
Sbjct: 21  NWLYELDELFE-IENIQKKNAEYMLFKSSPQKKKNVDSKVVLKPDVNQR 68


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,136,240
Number of Sequences: 27780
Number of extensions: 273815
Number of successful extensions: 723
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 708
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 723
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)