Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22a01
         (683 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    25   0.51 
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    23   3.6  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    22   6.3  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   8.3  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   8.3  

>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 25.4 bits (53), Expect = 0.51
 Identities = 16/60 (26%), Positives = 25/60 (41%)
 Frame = +2

Query: 479 FKRYPNHVKKKLAAVTYFKYYGPCRTIVRQHQDAHALYFIVSGEVTVTQMVFDELLQQYV 658
           FK  P     K++ V    +Y     I+RQ       + I  G+V VT    D   ++Y+
Sbjct: 221 FKNLPEETLIKISDVLEETFYNNGDYIIRQGARGDTFFIISRGQVRVTIKQPDTPEEKYI 280


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = +2

Query: 593 FIVSGEVTVTQMVFDELLQQYVSIE 667
           +++SG V  T  V   +++QYV ++
Sbjct: 426 YVISGIVKCTDFVDKAMVKQYVKVK 450


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -2

Query: 508 LLYVIRITLKTFQAANNSIY 449
           +LY++++TLK   A N  IY
Sbjct: 151 ILYMVKLTLKLSCAMNFLIY 170


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 10/39 (25%), Positives = 20/39 (51%)
 Frame = +2

Query: 287 LIEDSENYEGLENVKRRVQQAMRGKPKKKQLLSINDKAL 403
           L+E+ +NY   E V   +Q    G   + Q+ ++ +K +
Sbjct: 64  LVENLDNYNDKEAVNEFMQLLKHGMLPRGQVFTMMNKEM 102


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 10/39 (25%), Positives = 20/39 (51%)
 Frame = +2

Query: 287 LIEDSENYEGLENVKRRVQQAMRGKPKKKQLLSINDKAL 403
           L+E+ +NY   E V   +Q    G   + Q+ ++ +K +
Sbjct: 64  LVENLDNYNDKEAVNEFMQLLKHGMLPRGQVFTMMNKEM 102


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,725
Number of Sequences: 438
Number of extensions: 3902
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20830365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)