Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21p19
         (616 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_1094 + 34060262-34060385,34061256-34061428,34061505-340616...    29   2.9  
01_01_1176 - 9372879-9373097,9373814-9374278,9374372-9375447,937...    28   6.8  

>02_05_1094 +
           34060262-34060385,34061256-34061428,34061505-34061686,
           34061789-34062073,34062160-34062218,34062349-34062385,
           34062485-34062556,34063613-34063937,34064027-34064410
          Length = 546

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 90  FYVMFTSVCCKHCC 49
           F+++   +CCKHCC
Sbjct: 119 FFLVMLGICCKHCC 132


>01_01_1176 -
           9372879-9373097,9373814-9374278,9374372-9375447,
           9375534-9375687,9375783-9375879,9376238-9376374
          Length = 715

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = +2

Query: 509 LIKRYYGFKVKHHK--HYDGLTPSKETNVFNENVL 607
           L+ +Y+  + K      +D   PSKE+N F ENVL
Sbjct: 229 LLNKYFAERYKGRLIVRFDDTNPSKESNEFVENVL 263


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,667,841
Number of Sequences: 37544
Number of extensions: 230051
Number of successful extensions: 489
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 489
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1478421500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)