Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte21p17
(659 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 354 4e-98
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 354 4e-98
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 354 4e-98
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 352 1e-97
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 328 3e-90
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 326 1e-89
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 326 1e-89
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 326 1e-89
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 325 1e-89
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 322 1e-88
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 322 1e-88
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 322 2e-88
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 302 2e-82
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 298 2e-81
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 283 1e-76
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 256 1e-68
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 171 4e-43
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 169 2e-42
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 168 3e-42
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 168 3e-42
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 168 3e-42
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 167 6e-42
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 140 8e-34
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 140 8e-34
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 89 3e-18
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 89 3e-18
AL021474-2|CAA16309.3| 655|Caenorhabditis elegans Hypothetical ... 30 1.3
Z71265-3|CAA95835.2| 403|Caenorhabditis elegans Hypothetical pr... 29 2.9
AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear recep... 29 3.9
AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormo... 29 3.9
AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormo... 29 3.9
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso... 28 6.8
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 28 6.8
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 28 6.8
AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensor... 28 6.8
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor... 28 6.8
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 28 6.8
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 28 6.8
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 28 6.8
Z50795-5|CAA90665.2| 705|Caenorhabditis elegans Hypothetical pr... 27 8.9
U53153-8|AAC69040.1| 428|Caenorhabditis elegans Nuclear hormone... 27 8.9
AY305833-1|AAR11978.1| 428|Caenorhabditis elegans nuclear recep... 27 8.9
AF273785-1|AAG15134.1| 423|Caenorhabditis elegans nuclear recep... 27 8.9
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 354 bits (870), Expect = 4e-98
Identities = 160/196 (81%), Positives = 175/196 (89%)
Frame = +2
Query: 71 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 250
MRE ISIH GQAGVQIGNACWELYCLEHGIQPDGQMPSDK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 251 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 430
HVPRAV +DLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 431 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTA 610
R+R+LAD CTGLQGFL+ LLMERLSVDYGKK+KLEF+IYPAPQ+STA
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTA 180
Query: 611 VVEPYNSILTTHTTLE 658
VVEPYNSILTTHTTLE
Sbjct: 181 VVEPYNSILTTHTTLE 196
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 354 bits (870), Expect = 4e-98
Identities = 160/196 (81%), Positives = 175/196 (89%)
Frame = +2
Query: 71 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 250
MRE ISIH GQAGVQIGNACWELYCLEHGIQPDGQMPSDK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 251 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 430
HVPRAV +DLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 431 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTA 610
R+R+LAD CTGLQGFL+ LLMERLSVDYGKK+KLEF+IYPAPQ+STA
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTA 180
Query: 611 VVEPYNSILTTHTTLE 658
VVEPYNSILTTHTTLE
Sbjct: 181 VVEPYNSILTTHTTLE 196
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 354 bits (870), Expect = 4e-98
Identities = 160/196 (81%), Positives = 175/196 (89%)
Frame = +2
Query: 71 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 250
MRE ISIH GQAGVQIGNACWELYCLEHGIQPDGQMPSDK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 251 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 430
HVPRAV +DLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 431 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTA 610
R+R+LAD CTGLQGFL+ LLMERLSVDYGKK+KLEF+IYPAPQ+STA
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTA 180
Query: 611 VVEPYNSILTTHTTLE 658
VVEPYNSILTTHTTLE
Sbjct: 181 VVEPYNSILTTHTTLE 196
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 352 bits (865), Expect = 1e-97
Identities = 159/195 (81%), Positives = 174/195 (89%)
Frame = +2
Query: 74 RECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKH 253
RE ISIH GQAGVQIGNACWELYCLEHGIQPDGQMPSDK++GG DDSF+TFFSETG+G+H
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 254 VPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 433
VPRAV +DLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LDR
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDR 120
Query: 434 VRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTAV 613
+R+LAD CTGLQGFL+ LLMERLSVDYGKK+KLEF+IYPAPQ+STAV
Sbjct: 121 IRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAV 180
Query: 614 VEPYNSILTTHTTLE 658
VEPYNSILTTHTTLE
Sbjct: 181 VEPYNSILTTHTTLE 195
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 328 bits (805), Expect = 3e-90
Identities = 148/196 (75%), Positives = 169/196 (86%)
Frame = +2
Query: 71 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 250
MRE ISIH GQAGVQIGNACWELYCLEHGIQPDG MPSD+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 251 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 430
+VPR++F+DLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 431 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTA 610
R+R+LAD C+GLQGF + LLMERLSVDYGKKSKLEF+IYPAPQ+STA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 611 VVEPYNSILTTHTTLE 658
VVEPYNSILTTHTTLE
Sbjct: 179 VVEPYNSILTTHTTLE 194
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 326 bits (800), Expect = 1e-89
Identities = 147/196 (75%), Positives = 169/196 (86%)
Frame = +2
Query: 71 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 250
MRE ISIH GQAGVQIGNACWELYCLEHGIQPDG MP+ T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 251 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 430
+VPR++F+DLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 431 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTA 610
R+R+LAD C+GLQGF + LLMERLSVDYGKKSKLEF+IYPAPQ+STA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 611 VVEPYNSILTTHTTLE 658
VVEPYNSILTTHTTLE
Sbjct: 179 VVEPYNSILTTHTTLE 194
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 326 bits (800), Expect = 1e-89
Identities = 147/196 (75%), Positives = 168/196 (85%)
Frame = +2
Query: 71 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 250
MRE ISIH GQAGVQIGNACWELYCLEHGIQPDG MPSD+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 251 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 430
+VPR++F+DLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 431 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTA 610
R+R+LAD C+GLQGF + LLMERLSVDYGKKSKLEF+IYPAPQ+ TA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVCTA 178
Query: 611 VVEPYNSILTTHTTLE 658
VVEPYNSILTTHTTLE
Sbjct: 179 VVEPYNSILTTHTTLE 194
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 326 bits (800), Expect = 1e-89
Identities = 147/196 (75%), Positives = 169/196 (86%)
Frame = +2
Query: 71 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 250
MRE ISIH GQAGVQIGNACWELYCLEHGIQPDG MP+ T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 251 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 430
+VPR++F+DLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 431 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTA 610
R+R+LAD C+GLQGF + LLMERLSVDYGKKSKLEF+IYPAPQ+STA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 611 VVEPYNSILTTHTTLE 658
VVEPYNSILTTHTTLE
Sbjct: 179 VVEPYNSILTTHTTLE 194
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 325 bits (799), Expect = 1e-89
Identities = 146/198 (73%), Positives = 167/198 (84%)
Frame = +2
Query: 65 NKMRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGA 244
N+ RE ISIH GQAGVQ+GNACWELYCLEHGIQPDG + + ++G DDSFNTFFSET A
Sbjct: 4 NRSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMA 63
Query: 245 GKHVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 424
GKHVPRA+ +DLEPT +DE+RTGTY+ LFHPEQL+TGKEDAANNYARGHYTIGKEI+D+V
Sbjct: 64 GKHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVV 123
Query: 425 LDRVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQIS 604
+DRVR+L + C GLQGFL+ LLMERLSVDYGKKSKLEF IYPAPQ+S
Sbjct: 124 MDRVRRLVENCRGLQGFLVFHSFGGGTGSGFTALLMERLSVDYGKKSKLEFCIYPAPQVS 183
Query: 605 TAVVEPYNSILTTHTTLE 658
T++VEPYNSILTTHTTLE
Sbjct: 184 TSMVEPYNSILTTHTTLE 201
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 322 bits (792), Expect = 1e-88
Identities = 146/196 (74%), Positives = 167/196 (85%)
Frame = +2
Query: 71 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 250
MRE ISIH GQAGVQIGNACWELYCLEHGIQPDG MPS++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 251 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 430
+VPR++F+DLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
Query: 431 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTA 610
R+R+LAD C+GLQGF + LLMERLSVDYGKKSKLEF+IYPAPQ+STA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 611 VVEPYNSILTTHTTLE 658
VVEPYNSILTTHTTLE
Sbjct: 179 VVEPYNSILTTHTTLE 194
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 322 bits (792), Expect = 1e-88
Identities = 146/196 (74%), Positives = 167/196 (85%)
Frame = +2
Query: 71 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 250
MRE ISIH GQAGVQIGNACWELYCLEHGIQPDG MPS++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 251 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 430
+VPR++F+DLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
Query: 431 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTA 610
R+R+LAD C+GLQGF + LLMERLSVDYGKKSKLEF+IYPAPQ+STA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 611 VVEPYNSILTTHTTLE 658
VVEPYNSILTTHTTLE
Sbjct: 179 VVEPYNSILTTHTTLE 194
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 322 bits (790), Expect = 2e-88
Identities = 144/196 (73%), Positives = 167/196 (85%)
Frame = +2
Query: 71 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 250
MRE +SIH GQAGVQIGNACWELYCLEHGI PDG MP D + G D S+NTFFSET +GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 251 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 430
HVPRA+F+DLEPTV+DEVRTGTY +LFHPEQLI+GKEDAANNYARGHYTIGKE++D+V+D
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMD 120
Query: 431 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTA 610
RVR+L ++C LQGFLI L+MERLS+DYGKK+KLEF+IYPAPQIST+
Sbjct: 121 RVRRLTERCQSLQGFLIFHSFGGGTGSGFTSLVMERLSIDYGKKAKLEFSIYPAPQISTS 180
Query: 611 VVEPYNSILTTHTTLE 658
+VEPYNS+LTTHTTLE
Sbjct: 181 MVEPYNSLLTTHTTLE 196
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 302 bits (741), Expect = 2e-82
Identities = 137/196 (69%), Positives = 158/196 (80%)
Frame = +2
Query: 71 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 250
MRE ISIH GQAGVQIGNACWELYCLEHGI PDG + G S TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDG---TSMEPDGNSGSLGTFFSDTGYGR 57
Query: 251 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 430
HVPR++F+DLEPTVVDE+RTG Y++LFHPEQ++TGKEDAANNYARGHYT+GKEI+D LD
Sbjct: 58 HVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLD 117
Query: 431 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTA 610
R+R+LA+ C GLQGF + +LMERLS +YGKKSKLEF+IYPAPQIST+
Sbjct: 118 RIRRLANNCEGLQGFFVFHSFGGGTGSGFTSMLMERLSAEYGKKSKLEFSIYPAPQISTS 177
Query: 611 VVEPYNSILTTHTTLE 658
VVEPYNSILTTHTTLE
Sbjct: 178 VVEPYNSILTTHTTLE 193
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 298 bits (732), Expect = 2e-81
Identities = 136/195 (69%), Positives = 157/195 (80%)
Frame = +2
Query: 74 RECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKH 253
RE ISIH GQAGVQIGNACWEL+CLEHGIQPDG D T ++ NTFF+ET GKH
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKH 67
Query: 254 VPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 433
VPR +F+DLEPTVVDEVRTGTYR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+DR
Sbjct: 68 VPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDR 127
Query: 434 VRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTAV 613
V++LA+ C GLQGF+I LLMERLS +YGKK KLEFAIYPAPQ+ST++
Sbjct: 128 VKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSM 187
Query: 614 VEPYNSILTTHTTLE 658
VEPYNSIL THTTLE
Sbjct: 188 VEPYNSILMTHTTLE 202
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 283 bits (693), Expect = 1e-76
Identities = 126/195 (64%), Positives = 152/195 (77%)
Frame = +2
Query: 74 RECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKH 253
REC+SIH GQAG QIGNACWELYC+EHG+ G + ++ S FFSE+ GKH
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEK-NKKQQSLQAFFSESMNGKH 64
Query: 254 VPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 433
VPRA+++DLEPTV+DE+R G Y LFHP+Q+I GKEDAANNYARGHYTIGKE++D+VLDR
Sbjct: 65 VPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDR 124
Query: 434 VRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTAV 613
+RK + C GLQGFL+ LLMERLSV++GKKSKLEF++YPAPQ+ST+V
Sbjct: 125 IRKQTENCEGLQGFLVFHSFGGGTGSGFSSLLMERLSVEFGKKSKLEFSVYPAPQVSTSV 184
Query: 614 VEPYNSILTTHTTLE 658
VEPYNSILTTHTTLE
Sbjct: 185 VEPYNSILTTHTTLE 199
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 256 bits (626), Expect = 1e-68
Identities = 116/174 (66%), Positives = 138/174 (79%)
Frame = +2
Query: 137 LYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPRAVFIDLEPTVVDEVRTGT 316
++CLEHGIQPDG D T ++ NTFF+ET GKHVPR +F+DLEPTVVDEVRTGT
Sbjct: 1 MFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGT 60
Query: 317 YRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRVRKLADQCTGLQGFLIXXXXX 496
YR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+DRV++LA+ C GLQGF+I
Sbjct: 61 YRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFG 120
Query: 497 XXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLE 658
LLMERLS +YGKK KLEFAIYPAPQ+ST++VEPYNSIL THTTLE
Sbjct: 121 GGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSMVEPYNSILMTHTTLE 174
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 171 bits (416), Expect = 4e-43
Identities = 82/196 (41%), Positives = 117/196 (59%)
Frame = +2
Query: 71 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 250
MRE + + AGQ G QIG WE+ EHGIQPDG + + + N +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQL--ERINVYYNEANGGK 58
Query: 251 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 430
+VPRAV +DLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 431 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTA 610
VRK A+ C LQGF + LL+ ++ +Y + F++ P+P++S
Sbjct: 119 VVRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDT 178
Query: 611 VVEPYNSILTTHTTLE 658
VVEPYN+ L+ H +E
Sbjct: 179 VVEPYNATLSVHQLVE 194
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 169 bits (411), Expect = 2e-42
Identities = 80/196 (40%), Positives = 118/196 (60%)
Frame = +2
Query: 71 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 250
MRE + + AGQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQL--ERIDVYYNEANNGK 58
Query: 251 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 430
+VPRAV +DLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 431 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTA 610
+RK A+ C LQGF + LL+ ++ +Y + F++ P+P++S
Sbjct: 119 VIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDT 178
Query: 611 VVEPYNSILTTHTTLE 658
VVEPYN+ L+ H +E
Sbjct: 179 VVEPYNATLSVHQLVE 194
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 168 bits (408), Expect = 3e-42
Identities = 79/196 (40%), Positives = 118/196 (60%)
Frame = +2
Query: 71 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 250
MRE + + AGQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQL--ERIDVYYNEANNGK 58
Query: 251 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 430
+VPRAV +DLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 431 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTA 610
+RK A+ C LQGF + LL+ ++ ++ + F++ P+P++S
Sbjct: 119 VIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMSSFSVVPSPKVSDT 178
Query: 611 VVEPYNSILTTHTTLE 658
VVEPYN+ L+ H +E
Sbjct: 179 VVEPYNATLSVHQLVE 194
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 168 bits (408), Expect = 3e-42
Identities = 82/196 (41%), Positives = 117/196 (59%)
Frame = +2
Query: 71 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 250
MRE + I AGQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 251 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 430
+VPRAV +DLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 431 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTA 610
VRK A+ LQGF + LL+ ++ +Y + F++ P+P++S
Sbjct: 119 VVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDT 178
Query: 611 VVEPYNSILTTHTTLE 658
VVEPYN+ L+ H +E
Sbjct: 179 VVEPYNATLSVHQLVE 194
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 168 bits (408), Expect = 3e-42
Identities = 82/196 (41%), Positives = 117/196 (59%)
Frame = +2
Query: 71 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 250
MRE + I AGQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 251 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 430
+VPRAV +DLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 431 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTA 610
VRK A+ LQGF + LL+ ++ +Y + F++ P+P++S
Sbjct: 119 VVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDT 178
Query: 611 VVEPYNSILTTHTTLE 658
VVEPYN+ L+ H +E
Sbjct: 179 VVEPYNATLSVHQLVE 194
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 167 bits (406), Expect = 6e-42
Identities = 81/196 (41%), Positives = 114/196 (58%)
Frame = +2
Query: 71 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 250
MRE + I AGQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQL--ERINVYYNEASGGK 58
Query: 251 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 430
+VPRA +DLEP +D VR G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 431 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTA 610
VRK A+ C LQGF + LL+ ++ +Y + + F++ P+P++S
Sbjct: 119 VVRKEAESCDCLQGFQMTHSLGGGTGSGMGTLLISKIREEYPDRIMMTFSVVPSPKVSDT 178
Query: 611 VVEPYNSILTTHTTLE 658
VVEPYN+ L+ H +E
Sbjct: 179 VVEPYNATLSVHQLVE 194
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 140 bits (339), Expect = 8e-34
Identities = 70/190 (36%), Positives = 107/190 (56%)
Frame = +2
Query: 71 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 250
M+E I++ GQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 251 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 430
+VPRA+ +DL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLS 118
Query: 431 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTA 610
+R+ A+ L+GF + LL+ +L +Y K+ +I P+ ++S
Sbjct: 119 VIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDT 178
Query: 611 VVEPYNSILT 640
VVEPYN+IL+
Sbjct: 179 VVEPYNAILS 188
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 140 bits (339), Expect = 8e-34
Identities = 70/190 (36%), Positives = 107/190 (56%)
Frame = +2
Query: 71 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 250
M+E I++ GQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 251 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 430
+VPRA+ +DL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLS 118
Query: 431 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTA 610
+R+ A+ L+GF + LL+ +L +Y K+ +I P+ ++S
Sbjct: 119 VIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDT 178
Query: 611 VVEPYNSILT 640
VVEPYN+IL+
Sbjct: 179 VVEPYNAILS 188
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 89.0 bits (211), Expect = 3e-18
Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 4/196 (2%)
Frame = +2
Query: 83 ISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPR 262
+++H GQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 263 AVFIDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDR 433
AV +DLEP V++ +++ + LF+ + + A NN+A G Y G+E+ + ++D
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 434 VRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQIST-A 610
+ + A+ L G L LL+ERL + KK ++++ ST
Sbjct: 124 IIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDV 183
Query: 611 VVEPYNSILTTHTTLE 658
VV PYN +L+ +E
Sbjct: 184 VVHPYNWVLSMQRLIE 199
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 89.0 bits (211), Expect = 3e-18
Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 4/196 (2%)
Frame = +2
Query: 83 ISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPR 262
+++H GQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 263 AVFIDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDR 433
AV +DLEP V++ +++ + LF+ + + A NN+A G Y G+E+ + ++D
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 434 VRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQIST-A 610
+ + A+ L G L LL+ERL + KK ++++ ST
Sbjct: 124 IIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDV 183
Query: 611 VVEPYNSILTTHTTLE 658
VV PYN +L+ +E
Sbjct: 184 VVHPYNWVLSMQRLIE 199
>AL021474-2|CAA16309.3| 655|Caenorhabditis elegans Hypothetical
protein Y32F6A.3 protein.
Length = 655
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/57 (29%), Positives = 25/57 (43%)
Frame = -3
Query: 246 PAPVSLKNVLKESSPPPTVLSEGICPSGWMPCSRQYSSQHALPICTPAWPAWIDMHS 76
P PV L + + + PT +C W P + H +PI TPA+P H+
Sbjct: 273 PHPVVLNEMNNDRNDIPT-----LCELVWDPRRKNTDRFHVMPIITPAFPEQNSTHN 324
>Z71265-3|CAA95835.2| 403|Caenorhabditis elegans Hypothetical
protein M05B5.3 protein.
Length = 403
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -3
Query: 549 STERRSIRSDAKPDPVPPPN 490
S R SI SDA P+P PPP+
Sbjct: 213 SETRVSIESDAPPNPAPPPS 232
>AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear receptor
NHR-80 protein.
Length = 486
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/63 (26%), Positives = 29/63 (46%)
Frame = +2
Query: 113 QIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPRAVFIDLEPTV 292
QI +C CL +G++P G P + G FF+++G ++ F ++ P
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 115
Query: 293 VDE 301
DE
Sbjct: 116 ADE 118
>AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform b protein.
Length = 504
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/63 (26%), Positives = 29/63 (46%)
Frame = +2
Query: 113 QIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPRAVFIDLEPTV 292
QI +C CL +G++P G P + G FF+++G ++ F ++ P
Sbjct: 81 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 133
Query: 293 VDE 301
DE
Sbjct: 134 ADE 136
>AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform a protein.
Length = 486
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/63 (26%), Positives = 29/63 (46%)
Frame = +2
Query: 113 QIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPRAVFIDLEPTV 292
QI +C CL +G++P G P + G FF+++G ++ F ++ P
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 115
Query: 293 VDE 301
DE
Sbjct: 116 ADE 118
>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform g protein.
Length = 1604
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 290 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 433
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 625 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 670
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 290 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 433
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 839 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 884
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 290 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 433
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 975 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1020
>AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform c protein.
Length = 1167
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 290 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 433
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1024 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1069
>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform b protein.
Length = 1685
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 290 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 433
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1024 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1069
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 290 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 433
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1016 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1061
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 290 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 433
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1027 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1072
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 290 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 433
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1028 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1073
>Z50795-5|CAA90665.2| 705|Caenorhabditis elegans Hypothetical
protein R166.5a protein.
Length = 705
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +2
Query: 146 LEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPRAVFIDLE 283
L H Q D +P++ VGGG +F+ + +HV + F D E
Sbjct: 29 LNHLGQVDN-IPNNSAVGGGGAAFHHLHTSAATPRHVATSEFYDDE 73
>U53153-8|AAC69040.1| 428|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 44 protein.
Length = 428
Score = 27.5 bits (58), Expect = 8.9
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 221 TFFSETGAGKHVPRAVFIDLEPTVVD 298
T ++ TG+GK++ F DL P + D
Sbjct: 136 TTYTSTGSGKNIEYITFFDLTPIIKD 161
>AY305833-1|AAR11978.1| 428|Caenorhabditis elegans nuclear receptor
NHR-44 protein.
Length = 428
Score = 27.5 bits (58), Expect = 8.9
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 221 TFFSETGAGKHVPRAVFIDLEPTVVD 298
T ++ TG+GK++ F DL P + D
Sbjct: 136 TTYTSTGSGKNIEYITFFDLTPIIKD 161
>AF273785-1|AAG15134.1| 423|Caenorhabditis elegans nuclear receptor
NHR-44 protein.
Length = 423
Score = 27.5 bits (58), Expect = 8.9
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 221 TFFSETGAGKHVPRAVFIDLEPTVVD 298
T ++ TG+GK++ F DL P + D
Sbjct: 131 TTYTSTGSGKNIEYITFFDLTPIIKD 156
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,584,229
Number of Sequences: 27780
Number of extensions: 340890
Number of successful extensions: 1030
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1010
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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