Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte21p15
(603 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 25 0.43
AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 25 0.43
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 24 1.3
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 23 3.0
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 22 4.0
AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 22 4.0
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 22 5.3
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 21 9.3
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 21 9.3
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 21 9.3
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 9.3
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 9.3
>AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 25.4 bits (53), Expect = 0.43
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -1
Query: 165 LLYSRHSNILKFLCYPS 115
+LY S+++ FLCYPS
Sbjct: 300 MLYIPESDLVTFLCYPS 316
>AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 25.4 bits (53), Expect = 0.43
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -1
Query: 165 LLYSRHSNILKFLCYPS 115
+LY S+++ FLCYPS
Sbjct: 300 MLYIPESDLVTFLCYPS 316
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 23.8 bits (49), Expect = 1.3
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 268 RLFSHHTLASVRKLSFYFPYNLP 336
R+F HH R++S YF + P
Sbjct: 316 RIFGHHLNRLGREISTYFTFTRP 338
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 22.6 bits (46), Expect = 3.0
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = +1
Query: 67 YYALFVFYCLLIVYMI*WIAEKFKYITMSGVKQVRNKKLLPDLRKEG 207
+Y+L + L+ + ++A + Y G +Q R +L+P L +G
Sbjct: 433 WYSLASSWPALVPLALGFLAGELTYSQEIGDRQERESELVPYLENKG 479
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 22.2 bits (45), Expect = 4.0
Identities = 9/35 (25%), Positives = 18/35 (51%)
Frame = +1
Query: 250 GVPVTSRLFSHHTLASVRKLSFYFPYNLPDDSLDF 354
G+ +R F+H ++ + + Y P++L DF
Sbjct: 239 GLQKYTRSFAHQSINKEARSNLYLPFHLTLSFRDF 273
>AB086196-1|BAD06465.1| 289|Apis mellifera Period protein.
Length = 289
Score = 22.2 bits (45), Expect = 4.0
Identities = 9/35 (25%), Positives = 18/35 (51%)
Frame = +1
Query: 250 GVPVTSRLFSHHTLASVRKLSFYFPYNLPDDSLDF 354
G+ +R F+H ++ + + Y P++L DF
Sbjct: 234 GLQKYTRSFAHQSINKEARSNLYLPFHLTLSFRDF 268
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 21.8 bits (44), Expect = 5.3
Identities = 11/43 (25%), Positives = 20/43 (46%)
Frame = +1
Query: 193 LRKEGELTKEIILSTKEKHGVPVTSRLFSHHTLASVRKLSFYF 321
LR EG+ T + E + + + H T + ++SFY+
Sbjct: 753 LRLEGDETPPYGMELTEAEHYALYTAMAPHATASEFDEMSFYY 795
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 21.0 bits (42), Expect = 9.3
Identities = 8/33 (24%), Positives = 17/33 (51%)
Frame = -2
Query: 245 FSFVDNIISLVSSPSLRKSGRSFLFRTCFTPDI 147
F+FV+ I + L+K ++ ++ TP +
Sbjct: 312 FAFVNTIYRRKKTVPLKKVNSKYILKSTLTPKL 344
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.0 bits (42), Expect = 9.3
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -1
Query: 195 QIREKLFISYLLYSRHSNILKFLCYPSNHI 106
+I L +Y + ++N K LCY NHI
Sbjct: 80 KIISSLSNNYNYSNYNNNNYKQLCYNINHI 109
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 21.0 bits (42), Expect = 9.3
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +3
Query: 504 SFETRRYSRASVALQRKV 557
+ E R+ RAS+A QR++
Sbjct: 871 AIEKRKTLRASIAAQRRI 888
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.0 bits (42), Expect = 9.3
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +1
Query: 181 LLPDLRKEGELTKEIILSTKEKHGVPVT 264
+L LRK T +++ T+ GVP T
Sbjct: 1176 VLTGLRKYTNYTIQVLAFTRVGDGVPTT 1203
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.0 bits (42), Expect = 9.3
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +1
Query: 181 LLPDLRKEGELTKEIILSTKEKHGVPVT 264
+L LRK T +++ T+ GVP T
Sbjct: 1172 VLTGLRKYTNYTIQVLAFTRVGDGVPTT 1199
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,543
Number of Sequences: 438
Number of extensions: 3667
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17726685
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -