Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21p12
         (440 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   3.4  
DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    21   4.5  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    21   4.5  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    21   4.5  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    21   6.0  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   7.9  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   7.9  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   7.9  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = -2

Query: 196 CVTPWFVARFVK 161
           CV P FVA FVK
Sbjct: 124 CVVPSFVADFVK 135


>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +2

Query: 32  KCDQEGDNTCKILCNALATATK 97
           +C  EG+   ++L +ALAT  K
Sbjct: 56  RCTAEGNELKRVLPDALATDCK 77


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +2

Query: 32  KCDQEGDNTCKILCNALATATK 97
           +C  EG+   ++L +ALAT  K
Sbjct: 56  RCTAEGNELKRVLPDALATDCK 77


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +2

Query: 32  KCDQEGDNTCKILCNALATATK 97
           +C  EG+   ++L +ALAT  K
Sbjct: 56  RCTAEGNELKRVLPDALATDCK 77


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 9/28 (32%), Positives = 12/28 (42%)
 Frame = -2

Query: 376 NTVRFIYNFYRLSFIRKNNSVNKLYGSL 293
           NT+  IY+   L     N    +LY  L
Sbjct: 14  NTLHIIYSVAGLKIFEANPDTKRLYDDL 41


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -2

Query: 232 IFAAKWGFGSHVC 194
           +   KW FG H+C
Sbjct: 97  LLLGKWIFGIHLC 109


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -2

Query: 232 IFAAKWGFGSHVC 194
           +   KW FG H+C
Sbjct: 97  LLLGKWIFGIHLC 109


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -2

Query: 232 IFAAKWGFGSHVC 194
           +   KW FG H+C
Sbjct: 97  LLLGKWIFGIHLC 109


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,609
Number of Sequences: 438
Number of extensions: 1665
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11450997
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)