Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21p06
         (603 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    55   5e-10
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    22   4.0  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        22   5.3  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   9.3  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 55.2 bits (127), Expect = 5e-10
 Identities = 44/146 (30%), Positives = 70/146 (47%), Gaps = 14/146 (9%)
 Frame = +3

Query: 168 KIFKGTRVSINEHPYVVSIRRLYSHYAMGC---LLTRTVVISVAHPFVDVPVTDLGVVSG 338
           +I  GT   INE P +  I+R Y    M C   ++++  V++ AH  +D   T L +V G
Sbjct: 160 RIVGGTNTGINEFPMMAGIKRTYEP-GMICGATIISKRYVLTAAHCIIDENTTKLAIVVG 218

Query: 339 EN-YADRGHFLINVLF----LVIHEDFDRTTLNA----DLALITTIRDIEFRNKVKPIML 491
           E+ ++ +      VL     ++IH  +D    +     D+AL+ T +DI+F +KV P  L
Sbjct: 219 EHDWSSKTETNATVLHSINKVIIHPKYDIIEKDDWQINDIALLKTEKDIKFGDKVGPACL 278

Query: 492 IEPK--KPIANKNAFVTGWGRCAQNG 563
                    A  +  V GWG  + NG
Sbjct: 279 PFQHFLDSFAGSDVTVLGWGHTSFNG 304


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +1

Query: 454 TLSLGIKSNQLC*LNRKNR*QT 519
           T+ LG+K +QL  +N KN+  T
Sbjct: 60  TVQLGLKLSQLIEMNLKNQVMT 81


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 430 WPSLQPYGTLSLGI 471
           W SLQPY  LS+ +
Sbjct: 155 WASLQPYKKLSVEV 168


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 461 LNVPYGCNEGQ 429
           +NVPYG   GQ
Sbjct: 892 MNVPYGMQRGQ 902


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,151
Number of Sequences: 438
Number of extensions: 4014
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17726685
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)