Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21p05
         (685 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X68408-1|CAA48471.1|  723|Drosophila melanogaster SSRP1 protein.      334   5e-92
BT004831-1|AAO45187.1|  723|Drosophila melanogaster SD06504p pro...   334   5e-92
AE013599-3689|AAF47064.1|  723|Drosophila melanogaster CG4817-PA...   334   5e-92
L08825-1|AAA28914.1|  723|Drosophila melanogaster single-strande...   328   3e-90
AE014298-1399|AAF46544.1| 4498|Drosophila melanogaster CG2989-PA...    29   5.9  

>X68408-1|CAA48471.1|  723|Drosophila melanogaster SSRP1 protein.
          Length = 723

 Score =  334 bits (822), Expect = 5e-92
 Identities = 150/221 (67%), Positives = 186/221 (84%)
 Frame = +2

Query: 23  LEYNDVSAEIKGNMVPGRLKMTDQNIIFKNSKTGKVEQISANDIELVNFQKFIGSWGLRL 202
           LEYND++AE++G +  GRLKMT+QNIIFKN+KTGKVEQISA DI+L+N QKF+G+WGLR+
Sbjct: 5   LEYNDINAEVRGVLCSGRLKMTEQNIIFKNTKTGKVEQISAEDIDLINSQKFVGTWGLRV 64

Query: 203 FLKNGTLHRYGGFKEGEQEKVAKFFKANYNKDMLEKELSLKGWNWGTAKFNGAVLSFNVG 382
           F K G LHR+ GF++ E EK+ KF KA Y+++M+EKE+ +KGWNWGTA+F G+VLSF+  
Sbjct: 65  FTKGGVLHRFTGFRDSEHEKLGKFIKAAYSQEMVEKEMCVKGWNWGTARFMGSVLSFDKE 124

Query: 383 TNTAFEIPLHYVSQCNTGKNEVTLEFHQNDDTPVSLMEMRFHIPTSEVANDLDAVEAFHQ 562
           + T FE+PL +VSQC TGKNEVTLEFHQNDD PV L+EMRFHIP  E A + D V+ FHQ
Sbjct: 125 SKTIFEVPLSHVSQCVTGKNEVTLEFHQNDDAPVGLLEMRFHIPAVESAEE-DPVDKFHQ 183

Query: 563 QVMNKASVISVSGDAIAIFRELQCLTPRGRYDIKVFQTFFQ 685
            VM+KASVIS SG++IAIFRE+Q LTPRGRYDIK+F TFFQ
Sbjct: 184 NVMSKASVISASGESIAIFREIQILTPRGRYDIKIFSTFFQ 224


>BT004831-1|AAO45187.1|  723|Drosophila melanogaster SD06504p
           protein.
          Length = 723

 Score =  334 bits (822), Expect = 5e-92
 Identities = 150/221 (67%), Positives = 186/221 (84%)
 Frame = +2

Query: 23  LEYNDVSAEIKGNMVPGRLKMTDQNIIFKNSKTGKVEQISANDIELVNFQKFIGSWGLRL 202
           LEYND++AE++G +  GRLKMT+QNIIFKN+KTGKVEQISA DI+L+N QKF+G+WGLR+
Sbjct: 5   LEYNDINAEVRGVLCSGRLKMTEQNIIFKNTKTGKVEQISAEDIDLINSQKFVGTWGLRV 64

Query: 203 FLKNGTLHRYGGFKEGEQEKVAKFFKANYNKDMLEKELSLKGWNWGTAKFNGAVLSFNVG 382
           F K G LHR+ GF++ E EK+ KF KA Y+++M+EKE+ +KGWNWGTA+F G+VLSF+  
Sbjct: 65  FTKGGVLHRFTGFRDSEHEKLGKFIKAAYSQEMVEKEMCVKGWNWGTARFMGSVLSFDKE 124

Query: 383 TNTAFEIPLHYVSQCNTGKNEVTLEFHQNDDTPVSLMEMRFHIPTSEVANDLDAVEAFHQ 562
           + T FE+PL +VSQC TGKNEVTLEFHQNDD PV L+EMRFHIP  E A + D V+ FHQ
Sbjct: 125 SKTIFEVPLSHVSQCVTGKNEVTLEFHQNDDAPVGLLEMRFHIPAVESAEE-DPVDKFHQ 183

Query: 563 QVMNKASVISVSGDAIAIFRELQCLTPRGRYDIKVFQTFFQ 685
            VM+KASVIS SG++IAIFRE+Q LTPRGRYDIK+F TFFQ
Sbjct: 184 NVMSKASVISASGESIAIFREIQILTPRGRYDIKIFSTFFQ 224


>AE013599-3689|AAF47064.1|  723|Drosophila melanogaster CG4817-PA
           protein.
          Length = 723

 Score =  334 bits (822), Expect = 5e-92
 Identities = 150/221 (67%), Positives = 186/221 (84%)
 Frame = +2

Query: 23  LEYNDVSAEIKGNMVPGRLKMTDQNIIFKNSKTGKVEQISANDIELVNFQKFIGSWGLRL 202
           LEYND++AE++G +  GRLKMT+QNIIFKN+KTGKVEQISA DI+L+N QKF+G+WGLR+
Sbjct: 5   LEYNDINAEVRGVLCSGRLKMTEQNIIFKNTKTGKVEQISAEDIDLINSQKFVGTWGLRV 64

Query: 203 FLKNGTLHRYGGFKEGEQEKVAKFFKANYNKDMLEKELSLKGWNWGTAKFNGAVLSFNVG 382
           F K G LHR+ GF++ E EK+ KF KA Y+++M+EKE+ +KGWNWGTA+F G+VLSF+  
Sbjct: 65  FTKGGVLHRFTGFRDSEHEKLGKFIKAAYSQEMVEKEMCVKGWNWGTARFMGSVLSFDKE 124

Query: 383 TNTAFEIPLHYVSQCNTGKNEVTLEFHQNDDTPVSLMEMRFHIPTSEVANDLDAVEAFHQ 562
           + T FE+PL +VSQC TGKNEVTLEFHQNDD PV L+EMRFHIP  E A + D V+ FHQ
Sbjct: 125 SKTIFEVPLSHVSQCVTGKNEVTLEFHQNDDAPVGLLEMRFHIPAVESAEE-DPVDKFHQ 183

Query: 563 QVMNKASVISVSGDAIAIFRELQCLTPRGRYDIKVFQTFFQ 685
            VM+KASVIS SG++IAIFRE+Q LTPRGRYDIK+F TFFQ
Sbjct: 184 NVMSKASVISASGESIAIFREIQILTPRGRYDIKIFSTFFQ 224


>L08825-1|AAA28914.1|  723|Drosophila melanogaster single-stranded
           recognition proteinprotein.
          Length = 723

 Score =  328 bits (807), Expect = 3e-90
 Identities = 147/221 (66%), Positives = 185/221 (83%)
 Frame = +2

Query: 23  LEYNDVSAEIKGNMVPGRLKMTDQNIIFKNSKTGKVEQISANDIELVNFQKFIGSWGLRL 202
           LEYND++A+++G +  GRLKMT+QNIIF+N+KTGKVEQISA DI+L+N QKF+G+WGLR+
Sbjct: 5   LEYNDINAQVRGVLCSGRLKMTEQNIIFENTKTGKVEQISAEDIDLINSQKFVGTWGLRV 64

Query: 203 FLKNGTLHRYGGFKEGEQEKVAKFFKANYNKDMLEKELSLKGWNWGTAKFNGAVLSFNVG 382
           F K G LHR+ GF++ E EK+ KF KA Y+++M+EKE+ +KGWNWGTA+F G+VLSF+  
Sbjct: 65  FTKGGVLHRFTGFRDSEHEKLGKFIKAAYSQEMVEKEMCVKGWNWGTARFMGSVLSFDKE 124

Query: 383 TNTAFEIPLHYVSQCNTGKNEVTLEFHQNDDTPVSLMEMRFHIPTSEVANDLDAVEAFHQ 562
           + T FE+PL +VSQC TGKNEVTLEFHQNDD PV L+EMRFHIP  E A + D V+ FHQ
Sbjct: 125 SKTIFEVPLSHVSQCVTGKNEVTLEFHQNDDAPVGLLEMRFHIPAVESAEE-DPVDKFHQ 183

Query: 563 QVMNKASVISVSGDAIAIFRELQCLTPRGRYDIKVFQTFFQ 685
            VM+KASVIS SG++IAIFRE+Q LTPR RYDIK+F TFFQ
Sbjct: 184 NVMSKASVISASGESIAIFREIQILTPRRRYDIKIFSTFFQ 224


>AE014298-1399|AAF46544.1| 4498|Drosophila melanogaster CG2989-PA
           protein.
          Length = 4498

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
 Frame = +2

Query: 203 FLKNGTLHRYGGFKEGEQEKVAKFFKAN-YNKDMLEKELSLKGWNWGTAKFNGAVLS 370
           F K+  +  +  +++ EQ   AKF     YNK  L+  +++ GWN  +++F+  V S
Sbjct: 91  FTKDNQMKPFDKYQDIEQGGYAKFTGLKTYNKQ-LKTMIAIGGWNEASSRFSPLVAS 146


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,447,399
Number of Sequences: 53049
Number of extensions: 659367
Number of successful extensions: 1515
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1460
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1511
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2992560750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)