Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21p03
         (596 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z27081-3|CAH19085.1|  869|Caenorhabditis elegans Hypothetical pr...    29   2.5  
Z27081-2|CAA81607.2|  937|Caenorhabditis elegans Hypothetical pr...    29   2.5  
Z70270-3|CAA94227.1|  153|Caenorhabditis elegans Hypothetical pr...    28   4.4  
Z68752-3|CAE54905.1|  888|Caenorhabditis elegans Hypothetical pr...    28   5.8  
Z68752-2|CAE54904.1|  912|Caenorhabditis elegans Hypothetical pr...    28   5.8  
Z68752-1|CAA92981.1|  928|Caenorhabditis elegans Hypothetical pr...    28   5.8  
Z68006-3|CAA91997.2|  633|Caenorhabditis elegans Hypothetical pr...    28   5.8  
Z67990-4|CAA91935.1|  369|Caenorhabditis elegans Hypothetical pr...    27   7.7  

>Z27081-3|CAH19085.1|  869|Caenorhabditis elegans Hypothetical
           protein M01A8.2b protein.
          Length = 869

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
 Frame = +1

Query: 382 NDVGDCKKLW---RPQLGDVKAQMKASDVQNLQNQKSLLESLAKEYEMRV 522
           +++GD KK+    R +  +   QMK S+ Q ++N  + +ESL K +E ++
Sbjct: 516 SELGDLKKMLDEARKKFEEDVEQMKNSNQQVIRNHANAVESLQKTHETQI 565


>Z27081-2|CAA81607.2|  937|Caenorhabditis elegans Hypothetical
           protein M01A8.2a protein.
          Length = 937

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
 Frame = +1

Query: 382 NDVGDCKKLW---RPQLGDVKAQMKASDVQNLQNQKSLLESLAKEYEMRV 522
           +++GD KK+    R +  +   QMK S+ Q ++N  + +ESL K +E ++
Sbjct: 584 SELGDLKKMLDEARKKFEEDVEQMKNSNQQVIRNHANAVESLQKTHETQI 633


>Z70270-3|CAA94227.1|  153|Caenorhabditis elegans Hypothetical
           protein C53D6.5 protein.
          Length = 153

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 17/66 (25%), Positives = 31/66 (46%)
 Frame = +1

Query: 394 DCKKLWRPQLGDVKAQMKASDVQNLQNQKSLLESLAKEYEMRVNRLKNVISAKRGYLKAL 573
           +  K +R +   ++ + K  D +     K+  + L K+++ R+NR+K  I A    LK  
Sbjct: 79  ELNKFFRQRTEKLEIEQKLKDPKL---DKATSDELKKQWQERINRIKKYIEASDDKLKGY 135

Query: 574 QLDLQK 591
               QK
Sbjct: 136 DNHTQK 141


>Z68752-3|CAE54905.1|  888|Caenorhabditis elegans Hypothetical
           protein T12G3.2c protein.
          Length = 888

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = +1

Query: 451 SDVQNLQNQKSLLESLAKEYEMRVNRLKNVISAKRG 558
           S+ Q +Q  K+L+  L  E + RVNR+K   + +RG
Sbjct: 32  SEEQRMQKVKNLICKLLTEIDGRVNRIKQNNNHQRG 67


>Z68752-2|CAE54904.1|  912|Caenorhabditis elegans Hypothetical
           protein T12G3.2b protein.
          Length = 912

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = +1

Query: 451 SDVQNLQNQKSLLESLAKEYEMRVNRLKNVISAKRG 558
           S+ Q +Q  K+L+  L  E + RVNR+K   + +RG
Sbjct: 32  SEEQRMQKVKNLICKLLTEIDGRVNRIKQNNNHQRG 67


>Z68752-1|CAA92981.1|  928|Caenorhabditis elegans Hypothetical
           protein T12G3.2a protein.
          Length = 928

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = +1

Query: 451 SDVQNLQNQKSLLESLAKEYEMRVNRLKNVISAKRG 558
           S+ Q +Q  K+L+  L  E + RVNR+K   + +RG
Sbjct: 32  SEEQRMQKVKNLICKLLTEIDGRVNRIKQNNNHQRG 67


>Z68006-3|CAA91997.2|  633|Caenorhabditis elegans Hypothetical
           protein K09C8.4 protein.
          Length = 633

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 18/73 (24%), Positives = 36/73 (49%)
 Frame = -1

Query: 365 FSRISNFSGILSYSHILLISCTISSNIPCFKQLNMGNHFTRRNFALGTVSKKSSSLTRFT 186
           +  I + +G L    +L+I   +    P  + LN+ N  +R++  +  +  K+    R T
Sbjct: 456 YGTIIDQTGNLKQKEVLVIPA-LEMTYPQLR-LNLSNFLSRKDLVIEHLLNKTIQTFRET 513

Query: 185 MFPNSFNMTRLSK 147
           ++P+S   T +SK
Sbjct: 514 IWPSSHVPTNISK 526


>Z67990-4|CAA91935.1|  369|Caenorhabditis elegans Hypothetical
           protein F02D10.4 protein.
          Length = 369

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 25/98 (25%), Positives = 41/98 (41%)
 Frame = -1

Query: 350 NFSGILSYSHILLISCTISSNIPCFKQLNMGNHFTRRNFALGTVSKKSSSLTRFTMFPNS 171
           NF+  LS    ++  C +S  +PC K     N  ++ +      SK ++ L  F+     
Sbjct: 245 NFTISLSSGICIITDCHVSIIMPCRKDFFQKNGESKTDRDCSGPSKSAAPLINFSRI--- 301

Query: 170 FNMTRLSKGTSEFNISTSFSRSAKFSLIFIFSTLIAIK 57
           F + + S       +STS + S    LI  FS    +K
Sbjct: 302 FILEKDSNSPGTSALSTSKAVSENQILIIKFSIFRPLK 339


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,951,443
Number of Sequences: 27780
Number of extensions: 270100
Number of successful extensions: 889
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 862
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 885
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)