Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21p03
         (596 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   2.3  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    22   5.3  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    21   9.2  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = -1

Query: 134 FNISTSFSRSAKFSLIFIFSTLIAIKIDRNT*FKIHITQNYNS 6
           F IST        ++I +   LIAIK+ R+      + +N+ S
Sbjct: 222 FEISTMLFFVLPMTIIIVLYILIAIKLRRSRMLTATVNRNHLS 264


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = +1

Query: 403 KLWRPQLGDVKAQMKASDVQNLQNQKSLLESLAKEYEMRVN 525
           K WR  + +   + K  ++  L    S LE+  K YE+  N
Sbjct: 276 KEWRDFVDNYAEENKRDEIVLLTEAYSSLENTLKYYEVGSN 316


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 22/86 (25%), Positives = 39/86 (45%)
 Frame = -1

Query: 476 WFCKFCTSLAFICAFTSPNCGLHNFLQSPTSLNFSFCFSRISNFSGILSYSHILLISCTI 297
           +FC    SL+ +CA T  N  L  F+ +     F       S+ + ++SY +IL+    +
Sbjct: 57  FFCDMSPSLSLLCADTRLN-KLAVFIVAGAVGVF-------SSPTILISYIYILMAILRM 108

Query: 296 SSNIPCFKQLNMGNHFTRRNFALGTV 219
           S++  C       +H T    + GT+
Sbjct: 109 SADGGCRNFSTCSSHPTAAFISYGTL 134


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,595
Number of Sequences: 438
Number of extensions: 3108
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)