Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte21o24
(539 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0090 + 13493311-13494180 33 0.19
02_05_1134 - 34352154-34352375,34353683-34353746,34353820-343548... 31 0.78
12_02_0669 + 21695391-21697443,21698319-21699030,21699169-21699775 29 1.8
12_01_0373 + 2897874-2898911 29 1.8
08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,322... 29 1.8
12_01_0475 - 3722903-3723526,3724028-3724272,3725522-3725771 29 2.4
05_03_0597 + 16014809-16015120,16015234-16015398,16015497-160159... 29 2.4
04_01_0148 + 1710369-1710531,1711821-1712279,1712769-1712915,171... 29 3.1
09_02_0393 + 8510089-8510274,8510450-8510806,8510889-8511011,851... 28 5.5
06_03_1223 - 28526869-28527192,28527515-28527634,28527742-285278... 28 5.5
03_02_0310 + 7315185-7316820,7318332-7318879 28 5.5
02_05_0391 + 28563242-28563302,28563714-28563931,28564563-285646... 28 5.5
01_06_1315 + 36226262-36226533,36227946-36228060,36228710-362287... 27 7.2
12_02_1226 - 27182423-27182768,27182855-27183765 27 9.6
04_04_1188 + 31579833-31579914,31580001-31580176,31580822-315809... 27 9.6
>12_02_0090 + 13493311-13494180
Length = 289
Score = 32.7 bits (71), Expect = 0.19
Identities = 33/112 (29%), Positives = 45/112 (40%), Gaps = 8/112 (7%)
Frame = -3
Query: 369 TPIXSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSL 190
TP TTA + +L P TS+ + A +P + S V PT TSSL
Sbjct: 87 TPTAPSQTTAPSLATILVPATTSAPKPATASSPTKVPALSVNPILSIIG-VPSPTTTSSL 145
Query: 189 ITSVALAPV--------EDSIGSFTTTAGAATIVLEPTDTSSLITSVALTPV 58
T+ V S SFTTT+ T T ++ T + L+PV
Sbjct: 146 ATTTTSTAVLFPRSTLSSASTPSFTTTSSPVTAPKSST-KYTVATEIVLSPV 196
>02_05_1134 -
34352154-34352375,34353683-34353746,34353820-34354859,
34355193-34355261,34355502-34355606,34355992-34356161,
34356244-34356351,34356397-34356525,34356577-34356681,
34357186-34357475,34357575-34357679,34358195-34358289,
34358474-34358569,34358660-34358782,34359120-34359174,
34359254-34359417,34359881-34359971,34360180-34360334,
34360823-34361002,34361314-34361487,34361776-34361917,
34362023-34362325,34362443-34362522
Length = 1354
Score = 30.7 bits (66), Expect = 0.78
Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Frame = +2
Query: 68 SATEVINDEVSVGSKTIVAAPAVVVNDPIESSTGASATEVINDE-VSVGSKTIVAAP-AV 241
++T+++ D +S+GS P + P ++ T V + + VS S+ P A
Sbjct: 690 ASTDILIDLLSIGSSPSQNGPPAADSTPAQAITELFKINVPDTKPVSTISQVGAIVPEAT 749
Query: 242 VVNDVIESSTGASATEVINDEVSVGSKTIVAAP 340
V + SST SA ++D G+K+ A P
Sbjct: 750 DVLSSLSSSTSVSAFAKMSDTSIAGTKSAPAVP 782
>12_02_0669 + 21695391-21697443,21698319-21699030,21699169-21699775
Length = 1123
Score = 29.5 bits (63), Expect = 1.8
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 2/104 (1%)
Frame = +2
Query: 8 TIVAAPAVVVNDVIESPTGVSATEVINDEVSVGSKTIVAAPAVVVNDPIESSTGASATEV 187
T A+ V V ES S+ E D+ +V K + +V + ES +S V
Sbjct: 494 TEAASTEFVTAVVEESAPTASSVETSEDDSTVDDKLVEPTASVSATEA-ESKEDSSEGSV 552
Query: 188 INDEVSVGSKTIVAAP--AVVVNDVIESSTGASATEVINDEVSV 313
+ E SV + +AP +V + ++ ASA E+I D +V
Sbjct: 553 ASTE-SVTAVVEESAPVSSVAIEVPAPEASEASAQEIIEDSTTV 595
>12_01_0373 + 2897874-2898911
Length = 345
Score = 29.5 bits (63), Expect = 1.8
Identities = 22/55 (40%), Positives = 25/55 (45%)
Frame = -3
Query: 180 VALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALTPVGDSITSFTTTAGAA 16
+ALA V S S TTT A +DTS S + T G TS T A AA
Sbjct: 256 LALAAVPSSSSSDTTTTTTAAATTTTSDTSCSTASTSTTSNG--ATSVTAAATAA 308
>08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,
3220080-3223195,3223303-3223561,3223665-3223951,
3224029-3224364,3224463-3224604,3224690-3224910,
3224990-3225151,3225242-3225400,3225488-3225787,
3226306-3226569,3227370-3227453
Length = 1855
Score = 29.5 bits (63), Expect = 1.8
Identities = 22/89 (24%), Positives = 35/89 (39%)
Frame = -3
Query: 315 PTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSIGSFTT 136
PT S TS + +P S + + + + V PT + TS A +P S +
Sbjct: 1615 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSP 1674
Query: 135 TAGAATIVLEPTDTSSLITSVALTPVGDS 49
+ + PT S TS + +P S
Sbjct: 1675 SYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1703
>12_01_0475 - 3722903-3723526,3724028-3724272,3725522-3725771
Length = 372
Score = 29.1 bits (62), Expect = 2.4
Identities = 16/64 (25%), Positives = 29/64 (45%)
Frame = +2
Query: 11 IVAAPAVVVNDVIESPTGVSATEVINDEVSVGSKTIVAAPAVVVNDPIESSTGASATEVI 190
+ A A + DV+ +G V+ND+ G ++ VVV + G A E+
Sbjct: 273 LTARTAGIDEDVVLLDSGDGKVAVVNDDDDSGPLVVLQRRVVVVEEKGSLILGVEAAEIG 332
Query: 191 NDEV 202
++E+
Sbjct: 333 SEEI 336
Score = 27.1 bits (57), Expect = 9.6
Identities = 15/64 (23%), Positives = 28/64 (43%)
Frame = +2
Query: 116 IVAAPAVVVNDPIESSTGASATEVINDEVSVGSKTIVAAPAVVVNDVIESSTGASATEVI 295
+ A A + D + +G V+ND+ G ++ VVV + G A E+
Sbjct: 273 LTARTAGIDEDVVLLDSGDGKVAVVNDDDDSGPLVVLQRRVVVVEEKGSLILGVEAAEIG 332
Query: 296 NDEV 307
++E+
Sbjct: 333 SEEI 336
>05_03_0597 +
16014809-16015120,16015234-16015398,16015497-16015957,
16016057-16016233,16016331-16016679
Length = 487
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 2 PSTIVAAPAVVVNDVIESPTGVSATEVINDEVSVGSKTIVAAP 130
PS ++ P V + P G+S TE+++ V + S I+A+P
Sbjct: 67 PSLPLSPPPVSPSSYFAIPPGLSPTELLDSPVLLSSSHILASP 109
>04_01_0148 +
1710369-1710531,1711821-1712279,1712769-1712915,
1713004-1714170,1714378-1714430
Length = 662
Score = 28.7 bits (61), Expect = 3.1
Identities = 27/118 (22%), Positives = 52/118 (44%), Gaps = 1/118 (0%)
Frame = -2
Query: 526 LTNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDXSSLITSVALAPVEDSNXIIYN 347
L N +S T + + P + + + + G V +P++ +IT+ +A + + ++
Sbjct: 91 LLNCTSNKTLIGIPPAQYQVINISLDDGVL-FVNKPSNLGDIITTPTVA--NELHDFDFS 147
Query: 346 NSRCCNNSFGTHRYLIINYFGSTCSR*RLDYI-IYNNSRCCNNSFGTHRYLIINYFGS 176
S+ G R+ + N T +L Y + NNS C + S G H + Y G+
Sbjct: 148 GSQ------GIWRWAVANQTCHTARTDQLSYACVSNNSLCVHRSTGYHCKCSLGYGGN 199
>09_02_0393 +
8510089-8510274,8510450-8510806,8510889-8511011,
8511209-8511523,8511576-8511682,8512559-8512629,
8512952-8513029,8513390-8513454,8514224-8514274,
8514373-8514414,8514785-8515105,8515154-8517880
Length = 1480
Score = 27.9 bits (59), Expect = 5.5
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = +2
Query: 209 GSKTIVAAPAVVVNDVIESSTGASATEVINDEVSVGSKTIVAAPAVVVN 355
G K+ + +PA+ + S+ S T+ +N+EV+ +T+ AV+V+
Sbjct: 478 GMKSRILSPALPQQSYLSSAELPSLTDHVNEEVAKLDRTVRRITAVLVD 526
Score = 27.1 bits (57), Expect = 9.6
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = +2
Query: 104 GSKTIVAAPAVVVNDPIESSTGASATEVINDEVSVGSKTIVAAPAVVVN 250
G K+ + +PA+ + S+ S T+ +N+EV+ +T+ AV+V+
Sbjct: 478 GMKSRILSPALPQQSYLSSAELPSLTDHVNEEVAKLDRTVRRITAVLVD 526
>06_03_1223 -
28526869-28527192,28527515-28527634,28527742-28527816,
28527905-28527964,28528271-28528370,28528664-28529148,
28529243-28529437,28529532-28529762,28529851-28529967,
28530247-28530330,28530755-28530893,28530939-28531090
Length = 693
Score = 27.9 bits (59), Expect = 5.5
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = -2
Query: 502 TSVALAPVEDSIGSFTTTAGAATIVLEPTDXSSLITSVALAPVEDSN 362
+S ++P S+ S ++T + L SSL+ SV +P DSN
Sbjct: 368 SSSEISPKGSSVNSISSTERLSGCTLTSVSDSSLMASVMQSPSVDSN 414
>03_02_0310 + 7315185-7316820,7318332-7318879
Length = 727
Score = 27.9 bits (59), Expect = 5.5
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = -3
Query: 324 VLEPTD-TSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSIG 148
++ P D T+S++ + S+T T+ A + TD SL T + P + S
Sbjct: 530 IISPLDATNSILQFFKYGVTDYSVTGSTSKGILAAQASQSTDMRSLQTP-TITPPKSSFN 588
Query: 147 SFTTTAGAATIVLEPT 100
TTT+ T L+P+
Sbjct: 589 FKTTTSILDTDALKPS 604
>02_05_0391 +
28563242-28563302,28563714-28563931,28564563-28564637,
28564730-28565264,28565343-28565523,28565586-28565724,
28565826-28566067,28566157-28566322,28566591-28566698
Length = 574
Score = 27.9 bits (59), Expect = 5.5
Identities = 17/64 (26%), Positives = 28/64 (43%)
Frame = +2
Query: 53 SPTGVSATEVINDEVSVGSKTIVAAPAVVVNDPIESSTGASATEVINDEVSVGSKTIVAA 232
+P ++ ++DE V S ++VAA + + P SST E G +T
Sbjct: 9 APPALAVGTSLSDEGQVSSGSLVAAVEITMMTPGSSSTSVPGDEADAGNWDAGVETAARL 68
Query: 233 PAVV 244
A+V
Sbjct: 69 EAMV 72
>01_06_1315 +
36226262-36226533,36227946-36228060,36228710-36228752,
36229953-36230329,36230330-36230481,36230591-36230838,
36230919-36231047,36231130-36231739,36231842-36232086,
36232195-36232325
Length = 773
Score = 27.5 bits (58), Expect = 7.2
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Frame = -2
Query: 520 NASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDXSSL-ITSVALAPV---EDSNXII 353
N S + ++A+AP ++ G+F T A + PT S+ ++ L P+ D+N +
Sbjct: 515 NPGSPVYAMAIAPYTNTQGTFDNTTAVAVLEYAPTRASATGNNNLPLPPLPRYNDTNAVA 574
Query: 352 YNNSRCCNNSFGTHRY 305
+S+ S T RY
Sbjct: 575 NFSSKF--RSLATARY 588
>12_02_1226 - 27182423-27182768,27182855-27183765
Length = 418
Score = 27.1 bits (57), Expect = 9.6
Identities = 23/83 (27%), Positives = 31/83 (37%)
Frame = +2
Query: 23 PAVVVNDVIESPTGVSATEVINDEVSVGSKTIVAAPAVVVNDPIESSTGASATEVINDEV 202
PAV P+ V V + AAPA VV P++ S+ A+ V+ V
Sbjct: 185 PAVPATPSTSPPSNKEYAPAAPGVVPVNQPSSPAAPAGVVPAPVQPSSPAAPAGVVPAPV 244
Query: 203 SVGSKTIVAAPAVVVNDVIESST 271
S A P ND +T
Sbjct: 245 QPSSPA-TAVPKPPSNDPYAPAT 266
>04_04_1188 +
31579833-31579914,31580001-31580176,31580822-31580923,
31581015-31581245,31581821-31581922,31582092-31582184,
31582275-31582379,31582455-31582514,31582621-31582698,
31582778-31582924,31583011-31583109,31583178-31583267,
31583360-31583451,31583529-31583646,31583783-31583871,
31583998-31584088,31584203-31584294,31584442-31584749,
31584866-31584897
Length = 728
Score = 27.1 bits (57), Expect = 9.6
Identities = 21/78 (26%), Positives = 33/78 (42%)
Frame = +2
Query: 125 APAVVVNDPIESSTGASATEVINDEVSVGSKTIVAAPAVVVNDVIESSTGASATEVINDE 304
APAV E S+ +S +E +D +KTI+ A A V ESS + + +
Sbjct: 237 APAVAKKK--EESSESSDSESDSDSDDEAAKTIIPAKAAAVKKEEESSDSSDSDSESESD 294
Query: 305 VSVGSKTIVAAPAVVVND 358
+K + A + D
Sbjct: 295 SDEPAKPTIPAKRPLTKD 312
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,695,431
Number of Sequences: 37544
Number of extensions: 222756
Number of successful extensions: 795
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 783
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1198356516
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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