Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21o13
         (570 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039716-4|AAB96739.1|  616|Caenorhabditis elegans Aminopeptidas...    66   2e-11
AC084155-7|AAG23366.3| 1061|Caenorhabditis elegans Hypothetical ...    51   5e-07
Z79596-4|CAB01856.2|  554|Caenorhabditis elegans Hypothetical pr...    27   7.2  
Z79596-3|CAI79132.1|  561|Caenorhabditis elegans Hypothetical pr...    27   7.2  
U32305-18|AAK18852.2|  719|Caenorhabditis elegans Hypothetical p...    27   9.5  

>AF039716-4|AAB96739.1|  616|Caenorhabditis elegans Aminopeptidase p
           protein 1 protein.
          Length = 616

 Score = 65.7 bits (153), Expect = 2e-11
 Identities = 29/63 (46%), Positives = 43/63 (68%)
 Frame = +3

Query: 264 VAFYTISLAPHQTACLDVNLLTDLEIKYLNNYHARVLTTLGPILEQRGYNDVLEWLTDEC 443
           + F +++L P QT+ +D +LL + EI +LN YHARVL  +G  L++RG  D L+WL + C
Sbjct: 554 LTFKSLTLVPIQTSIVDKSLLIEEEINWLNQYHARVLKEVGEHLQKRGKTDELKWLAEAC 613

Query: 444 API 452
            PI
Sbjct: 614 KPI 616


>AC084155-7|AAG23366.3| 1061|Caenorhabditis elegans Hypothetical
            protein Y45G5AM.2 protein.
          Length = 1061

 Score = 51.2 bits (117), Expect = 5e-07
 Identities = 23/61 (37%), Positives = 37/61 (60%)
 Frame = +3

Query: 270  FYTISLAPHQTACLDVNLLTDLEIKYLNNYHARVLTTLGPILEQRGYNDVLEWLTDECAP 449
            F  ++L P QT+ ++ +LLT  EI +LN YH +V + +G IL +    +  +WL + C P
Sbjct: 1001 FEPLTLIPIQTSIVNKDLLTSEEINWLNKYHFKVFSKIGYILRKENRMEEYDWLFNACQP 1060

Query: 450  I 452
            I
Sbjct: 1061 I 1061


>Z79596-4|CAB01856.2|  554|Caenorhabditis elegans Hypothetical
           protein C02C6.2b protein.
          Length = 554

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 17/60 (28%), Positives = 30/60 (50%)
 Frame = -2

Query: 320 IDIKARCLMRRQGYRVERYGASPIKITDNAVSQYMISAAVHLDSLDQIFVANPVLPYFVV 141
           + I+AR ++R     V+   A  IK+  N  ++ +++  + L  L  I  A P LP F +
Sbjct: 234 LQIRARRVVRN----VKSLAAQTIKVCKNYATKTVVTGLIDLTVLLSISFAFPALPLFYI 289


>Z79596-3|CAI79132.1|  561|Caenorhabditis elegans Hypothetical
           protein C02C6.2a protein.
          Length = 561

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 17/60 (28%), Positives = 30/60 (50%)
 Frame = -2

Query: 320 IDIKARCLMRRQGYRVERYGASPIKITDNAVSQYMISAAVHLDSLDQIFVANPVLPYFVV 141
           + I+AR ++R     V+   A  IK+  N  ++ +++  + L  L  I  A P LP F +
Sbjct: 241 LQIRARRVVRN----VKSLAAQTIKVCKNYATKTVVTGLIDLTVLLSISFAFPALPLFYI 296


>U32305-18|AAK18852.2|  719|Caenorhabditis elegans Hypothetical
           protein B0336.3 protein.
          Length = 719

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 2/28 (7%)
 Frame = +3

Query: 417 VLEWLTDECAPITRS--NAPAKVVTPLV 494
           + +WL+DE +PIT +  NA AK V  LV
Sbjct: 9   LFDWLSDELSPITDADPNALAKYVLALV 36


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,289,550
Number of Sequences: 27780
Number of extensions: 230121
Number of successful extensions: 633
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 633
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1187327456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)