Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21o12
         (615 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        25   0.78 
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        25   0.78 
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        25   0.78 
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       23   3.1  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   3.1  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    22   4.1  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   9.6  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   9.6  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 24.6 bits (51), Expect = 0.78
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +3

Query: 78  DNVNNVEICQISLTDIGR 131
           + VNNVE  Q  LTD+G+
Sbjct: 315 NGVNNVEAVQKELTDLGK 332


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 24.6 bits (51), Expect = 0.78
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +3

Query: 78  DNVNNVEICQISLTDIGR 131
           + VNNVE  Q  LTD+G+
Sbjct: 315 NGVNNVEAVQKELTDLGK 332


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 24.6 bits (51), Expect = 0.78
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +3

Query: 78  DNVNNVEICQISLTDIGR 131
           + VNNVE  Q  LTD+G+
Sbjct: 315 NGVNNVEAVQKELTDLGK 332


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 250 DWGNSDHRSDPEVLIFALHE 309
           D+GN D+R+D     FA  E
Sbjct: 120 DYGNQDNRNDRRKKTFAARE 139


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
            receptor protein.
          Length = 1040

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 9/41 (21%), Positives = 22/41 (53%)
 Frame = +2

Query: 242  VAWTGAIVITVVILRSLYLLYMKPEESRIKNMFKFRKLNTK 364
            ++ + ++ I  +    LY++ ++PE +  ++M   R   TK
Sbjct: 886  ISLSASVTIACLFSPKLYIILIRPERNVRQSMMPTRYSTTK 926


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = -1

Query: 93  HY*HCQEMVLGFYCSVTFLFWF*CIFELS 7
           H+ +     +  +  V FL+W  CI  +S
Sbjct: 319 HHRNADTHEMSEWVKVVFLYWLPCILRMS 347


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/37 (21%), Positives = 20/37 (54%)
 Frame = -3

Query: 427 MYIDRFKRESLPFFF*LNI*KLCVEFSKFKHVFYSGF 317
           + + R K+E +PF   L +  +  E++++    + G+
Sbjct: 604 LLLPRGKKEGMPFQLFLYVSPVSSEYNQYNSRIWGGY 640


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/37 (21%), Positives = 20/37 (54%)
 Frame = -3

Query: 427 MYIDRFKRESLPFFF*LNI*KLCVEFSKFKHVFYSGF 317
           + + R K+E +PF   L +  +  E++++    + G+
Sbjct: 604 LLLPRGKKEGMPFQLFLYVSPVSSEYNQYNSRIWGGY 640


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,541
Number of Sequences: 438
Number of extensions: 3594
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18215697
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)