Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21o08
         (632 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    29   0.032
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    22   4.9  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    22   4.9  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   8.6  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   8.6  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 29.1 bits (62), Expect = 0.032
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = -1

Query: 224 ICSFVTSIKMFRYSCKYPFFIMDYQGIKCTYYLMYLFSLLIFSTH*FY 81
           +CS   ++ +  Y C  PF I     + CTYY  Y F +L+   + +Y
Sbjct: 74  LCSGYFTVHLLFY-C--PFIIFTVHFLLCTYYFYYAFIILLCVYYFYY 118


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 69  FTSLIFFNSVYCGFISQFV 13
           FT + FF ++ C FI+  V
Sbjct: 71  FTHIFFFFAICCDFIALIV 89


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +3

Query: 486 STPWSSETWDSAVFNSANSEKTLTPKSSTSYGA 584
           S+P SS ++D    N     + L+P S   Y A
Sbjct: 136 SSPMSSGSYDPYSPNGKIGREDLSPSSLNGYSA 168


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
          peptide receptor 1 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -2

Query: 88 NFMI*TFYVFDFLQFCVLW 32
          N  +  FY F+  QF +LW
Sbjct: 14 NTSLDAFYFFETEQFTLLW 32


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/26 (26%), Positives = 17/26 (65%)
 Frame = -1

Query: 218 SFVTSIKMFRYSCKYPFFIMDYQGIK 141
           SF+TS+   + + ++P F+ ++  I+
Sbjct: 102 SFMTSVLFSQVASRWPLFLNEWTKIE 127


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,058
Number of Sequences: 336
Number of extensions: 2707
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)