Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte21o07
(611 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC117114-1|AAI17115.1| 376|Homo sapiens SWI/SNF related, matrix... 177 3e-44
AJ011738-1|CAA09759.1| 376|Homo sapiens Ini1b protein. 177 3e-44
AB017523-1|BAC77068.1| 376|Homo sapiens Ini1 protein. 177 3e-44
DQ230988-1|ABB02184.1| 385|Homo sapiens SWI/SNF related, matrix... 171 2e-42
CR456581-1|CAG30467.1| 385|Homo sapiens SMARCB1 protein. 171 2e-42
AJ011737-1|CAA09758.1| 385|Homo sapiens integrase interactor 1a... 171 2e-42
U04847-1|AAA81905.1| 385|Homo sapiens Ini1 protein. 168 2e-41
AK024025-1|BAB14784.1| 394|Homo sapiens protein ( Homo sapiens ... 161 1e-39
Y17118-1|CAA76639.1| 355|Homo sapiens SNF5/INI1 protein protein. 132 1e-30
AY207470-1|AAO59166.1| 80|Homo sapiens integrase interactor 1 ... 52 1e-06
AY207471-1|AAO59167.1| 89|Homo sapiens integrase interactor 1 ... 47 5e-05
BC150265-1|AAI50266.1| 1481|Homo sapiens CRKRS protein protein. 30 5.6
AF227198-1|AAF36401.1| 1490|Homo sapiens CrkRS protein. 30 5.6
AB020711-1|BAA74927.2| 1535|Homo sapiens KIAA0904 protein protein. 30 5.6
>BC117114-1|AAI17115.1| 376|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 376
Score = 177 bits (431), Expect = 3e-44
Identities = 91/169 (53%), Positives = 119/169 (70%), Gaps = 5/169 (2%)
Frame = +3
Query: 120 MAL-RTYGDKPISFQIEEGGDFYCVGSEVGNYLRLFRGSLYKKYPGMCRRTLTNEERKRL 296
MAL +T+G KP+ FQ+E+ G+FY +GSEVGNYLR+FRGSLYK+YP + RR T EERK++
Sbjct: 4 MALSKTFGQKPVKFQLEDDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEERKKI 63
Query: 297 I--DNGLGPHXXXXXXXXXKASEVEDIIEGNDDKYKAVSVSQELAT-PRESKSKKPHTPS 467
+ + G KASEVE+I++GND+KYKAVS+S E T RE K+K+
Sbjct: 64 VASSHDHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYLREQKAKR--NSQ 121
Query: 468 WLPVMPNSS-HLDAVPQATPISRSRVHNKKVRTFPLCFDDTDMTAMLEN 611
W+P +PNSS HLDAVP +T I+R+R+ K RTFPLCFDD D + EN
Sbjct: 122 WVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHEN 170
>AJ011738-1|CAA09759.1| 376|Homo sapiens Ini1b protein.
Length = 376
Score = 177 bits (431), Expect = 3e-44
Identities = 91/169 (53%), Positives = 119/169 (70%), Gaps = 5/169 (2%)
Frame = +3
Query: 120 MAL-RTYGDKPISFQIEEGGDFYCVGSEVGNYLRLFRGSLYKKYPGMCRRTLTNEERKRL 296
MAL +T+G KP+ FQ+E+ G+FY +GSEVGNYLR+FRGSLYK+YP + RR T EERK++
Sbjct: 4 MALSKTFGQKPVKFQLEDDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEERKKI 63
Query: 297 I--DNGLGPHXXXXXXXXXKASEVEDIIEGNDDKYKAVSVSQELAT-PRESKSKKPHTPS 467
+ + G KASEVE+I++GND+KYKAVS+S E T RE K+K+
Sbjct: 64 VASSHDHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYLREQKAKR--NSQ 121
Query: 468 WLPVMPNSS-HLDAVPQATPISRSRVHNKKVRTFPLCFDDTDMTAMLEN 611
W+P +PNSS HLDAVP +T I+R+R+ K RTFPLCFDD D + EN
Sbjct: 122 WVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHEN 170
>AB017523-1|BAC77068.1| 376|Homo sapiens Ini1 protein.
Length = 376
Score = 177 bits (431), Expect = 3e-44
Identities = 91/169 (53%), Positives = 119/169 (70%), Gaps = 5/169 (2%)
Frame = +3
Query: 120 MAL-RTYGDKPISFQIEEGGDFYCVGSEVGNYLRLFRGSLYKKYPGMCRRTLTNEERKRL 296
MAL +T+G KP+ FQ+E+ G+FY +GSEVGNYLR+FRGSLYK+YP + RR T EERK++
Sbjct: 4 MALSKTFGQKPVKFQLEDDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEERKKI 63
Query: 297 I--DNGLGPHXXXXXXXXXKASEVEDIIEGNDDKYKAVSVSQELAT-PRESKSKKPHTPS 467
+ + G KASEVE+I++GND+KYKAVS+S E T RE K+K+
Sbjct: 64 VASSHDHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYLREQKAKR--NSQ 121
Query: 468 WLPVMPNSS-HLDAVPQATPISRSRVHNKKVRTFPLCFDDTDMTAMLEN 611
W+P +PNSS HLDAVP +T I+R+R+ K RTFPLCFDD D + EN
Sbjct: 122 WVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHEN 170
>DQ230988-1|ABB02184.1| 385|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 385
Score = 171 bits (416), Expect = 2e-42
Identities = 92/178 (51%), Positives = 121/178 (67%), Gaps = 14/178 (7%)
Frame = +3
Query: 120 MAL-RTYGDKPISFQIEEGGDFYCVGSEVGNYLRLFRGSLYKKYPGMCRRTLTNEERKRL 296
MAL +T+G KP+ FQ+E+ G+FY +GSEVGNYLR+FRGSLYK+YP + RR T EERK++
Sbjct: 4 MALSKTFGQKPVKFQLEDDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEERKKI 63
Query: 297 IDNGLG----PH-------XXXXXXXXXKASEVEDIIEGNDDKYKAVSVSQELAT-PRES 440
+ + G P+ KASEVE+I++GND+KYKAVS+S E T RE
Sbjct: 64 VASSHGKKTKPNTKDHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYLREQ 123
Query: 441 KSKKPHTPSWLPVMPNSS-HLDAVPQATPISRSRVHNKKVRTFPLCFDDTDMTAMLEN 611
K+K+ W+P +PNSS HLDAVP +T I+R+R+ K RTFPLCFDD D + EN
Sbjct: 124 KAKR--NSQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHEN 179
>CR456581-1|CAG30467.1| 385|Homo sapiens SMARCB1 protein.
Length = 385
Score = 171 bits (416), Expect = 2e-42
Identities = 92/178 (51%), Positives = 121/178 (67%), Gaps = 14/178 (7%)
Frame = +3
Query: 120 MAL-RTYGDKPISFQIEEGGDFYCVGSEVGNYLRLFRGSLYKKYPGMCRRTLTNEERKRL 296
MAL +T+G KP+ FQ+E+ G+FY +GSEVGNYLR+FRGSLYK+YP + RR T EERK++
Sbjct: 4 MALSKTFGQKPVKFQLEDDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEERKKI 63
Query: 297 IDNGLG----PH-------XXXXXXXXXKASEVEDIIEGNDDKYKAVSVSQELAT-PRES 440
+ + G P+ KASEVE+I++GND+KYKAVS+S E T RE
Sbjct: 64 VASSHGKKTKPNTKDHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYLREQ 123
Query: 441 KSKKPHTPSWLPVMPNSS-HLDAVPQATPISRSRVHNKKVRTFPLCFDDTDMTAMLEN 611
K+K+ W+P +PNSS HLDAVP +T I+R+R+ K RTFPLCFDD D + EN
Sbjct: 124 KAKR--NSQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHEN 179
>AJ011737-1|CAA09758.1| 385|Homo sapiens integrase interactor 1a
protein (INI1A) protein.
Length = 385
Score = 171 bits (416), Expect = 2e-42
Identities = 92/178 (51%), Positives = 121/178 (67%), Gaps = 14/178 (7%)
Frame = +3
Query: 120 MAL-RTYGDKPISFQIEEGGDFYCVGSEVGNYLRLFRGSLYKKYPGMCRRTLTNEERKRL 296
MAL +T+G KP+ FQ+E+ G+FY +GSEVGNYLR+FRGSLYK+YP + RR T EERK++
Sbjct: 4 MALSKTFGQKPVKFQLEDDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEERKKI 63
Query: 297 IDNGLG----PH-------XXXXXXXXXKASEVEDIIEGNDDKYKAVSVSQELAT-PRES 440
+ + G P+ KASEVE+I++GND+KYKAVS+S E T RE
Sbjct: 64 VASSHGKKTKPNTKDHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYLREQ 123
Query: 441 KSKKPHTPSWLPVMPNSS-HLDAVPQATPISRSRVHNKKVRTFPLCFDDTDMTAMLEN 611
K+K+ W+P +PNSS HLDAVP +T I+R+R+ K RTFPLCFDD D + EN
Sbjct: 124 KAKR--NSQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHEN 179
>U04847-1|AAA81905.1| 385|Homo sapiens Ini1 protein.
Length = 385
Score = 168 bits (408), Expect = 2e-41
Identities = 91/178 (51%), Positives = 120/178 (67%), Gaps = 14/178 (7%)
Frame = +3
Query: 120 MAL-RTYGDKPISFQIEEGGDFYCVGSEVGNYLRLFRGSLYKKYPGMCRRTLTNEERKRL 296
MAL +T+G KP+ FQ+E+ G+FY +GSEVGNYLR+FRGSLYK+YP + RR T EERK++
Sbjct: 4 MALSKTFGQKPVKFQLEDDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEERKKI 63
Query: 297 IDNGLG----PH-------XXXXXXXXXKASEVEDIIEGNDDKYKAVSVSQELAT-PRES 440
+ + G P+ KASEVE+I++GND+KYKAVS+S E T RE
Sbjct: 64 VASSHGKKTKPNTKDHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYLREQ 123
Query: 441 KSKKPHTPSWLPVMPNSS-HLDAVPQATPISRSRVHNKKVRTFPLCFDDTDMTAMLEN 611
K+K+ W+P + NSS HLDAVP +T I+R+R+ K RTFPLCFDD D + EN
Sbjct: 124 KAKR--NSQWVPTLSNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHEN 179
>AK024025-1|BAB14784.1| 394|Homo sapiens protein ( Homo sapiens
cDNA FLJ13963 fis, clone Y79AA1001299, highly similar to
Homo sapiens mRNA for integrase interactor 1b protein
(INI1B). ).
Length = 394
Score = 161 bits (392), Expect = 1e-39
Identities = 84/156 (53%), Positives = 110/156 (70%), Gaps = 5/156 (3%)
Frame = +3
Query: 120 MAL-RTYGDKPISFQIEEGGDFYCVGSEVGNYLRLFRGSLYKKYPGMCRRTLTNEERKRL 296
MAL +T+G KP+ FQ+E+ G+FY +GSEVGNYLR+FRGSLYK+YP + RR T EERK++
Sbjct: 4 MALSKTFGQKPVKFQLEDDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEERKKI 63
Query: 297 I--DNGLGPHXXXXXXXXXKASEVEDIIEGNDDKYKAVSVSQELAT-PRESKSKKPHTPS 467
+ + G KASEVE+I++GND+KYKAVS+S E T RE K+K+
Sbjct: 64 VASSHDHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYLREQKAKR--NSQ 121
Query: 468 WLPVMPNSS-HLDAVPQATPISRSRVHNKKVRTFPL 572
W+P +PNSS HLDAVP +T I+R R+ K RTFPL
Sbjct: 122 WVPTLPNSSHHLDAVPCSTTINRDRMGRDKKRTFPL 157
>Y17118-1|CAA76639.1| 355|Homo sapiens SNF5/INI1 protein protein.
Length = 355
Score = 132 bits (318), Expect = 1e-30
Identities = 75/150 (50%), Positives = 97/150 (64%), Gaps = 13/150 (8%)
Frame = +3
Query: 201 VGNYLRLFRGSLYKKYPGMCRRTLTNEERKRLIDNGLG----PHXXXXXXXXX------- 347
VGNYLR+FRGSLYK+YP + RR T EERK+++ + G P+
Sbjct: 2 VGNYLRMFRGSLYKRYPSLWRRLATVEERKKIVASSHGKKTKPNTKDHGYTTLATSVTLL 61
Query: 348 KASEVEDIIEGNDDKYKAVSVSQELATP-RESKSKKPHTPSWLPVMPNSSH-LDAVPQAT 521
KASEVE+I++GND+KYKAVS+S E T RE K+K+ W+P + NSSH LDAVP +T
Sbjct: 62 KASEVEEILDGNDEKYKAVSISTEPPTYLREQKAKR--NSQWVPTLSNSSHHLDAVPCST 119
Query: 522 PISRSRVHNKKVRTFPLCFDDTDMTAMLEN 611
I+R+R+ K RTFPLCFDD D + EN
Sbjct: 120 TINRNRMGRDKKRTFPLCFDDHDPAVIHEN 149
>AY207470-1|AAO59166.1| 80|Homo sapiens integrase interactor 1
protein isoform D protein.
Length = 80
Score = 52.4 bits (120), Expect = 1e-06
Identities = 31/67 (46%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Frame = +3
Query: 261 RRTLTNEERKRLI--DNGLGPHXXXXXXXXXKASEVEDIIEGNDDKYKAVSVSQELAT-P 431
RR T EERK+++ + G KASEVE+I++GND+KYKAVS+S E T
Sbjct: 2 RRLATVEERKKIVASSHDHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYL 61
Query: 432 RESKSKK 452
RE K+K+
Sbjct: 62 REQKAKR 68
>AY207471-1|AAO59167.1| 89|Homo sapiens integrase interactor 1
protein isoform E protein.
Length = 89
Score = 47.2 bits (107), Expect = 5e-05
Identities = 23/36 (63%), Positives = 30/36 (83%), Gaps = 1/36 (2%)
Frame = +3
Query: 348 KASEVEDIIEGNDDKYKAVSVSQELAT-PRESKSKK 452
KASEVE+I++GND+KYKAVS+S E T RE K+K+
Sbjct: 42 KASEVEEILDGNDEKYKAVSISTEPPTYLREQKAKR 77
>BC150265-1|AAI50266.1| 1481|Homo sapiens CRKRS protein protein.
Length = 1481
Score = 30.3 bits (65), Expect = 5.6
Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +3
Query: 360 VEDI-IEGNDDKYKAVSVSQELATPRESKSKKPHTPSWLPVMPNSSHLDAVPQATP 524
V+D+ +G D K +++ +E+ TP+E+++ + TP LP + +S +P TP
Sbjct: 492 VKDLKAQGTRDS-KPIALKEEIVTPKETETSEKETPPPLPTI--ASPPPPLPTTTP 544
>AF227198-1|AAF36401.1| 1490|Homo sapiens CrkRS protein.
Length = 1490
Score = 30.3 bits (65), Expect = 5.6
Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +3
Query: 360 VEDI-IEGNDDKYKAVSVSQELATPRESKSKKPHTPSWLPVMPNSSHLDAVPQATP 524
V+D+ +G D K +++ +E+ TP+E+++ + TP LP + +S +P TP
Sbjct: 492 VKDLKAQGTRDS-KPIALKEEIVTPKETETSEKETPPPLPTI--ASPPPPLPTTTP 544
>AB020711-1|BAA74927.2| 1535|Homo sapiens KIAA0904 protein protein.
Length = 1535
Score = 30.3 bits (65), Expect = 5.6
Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +3
Query: 360 VEDI-IEGNDDKYKAVSVSQELATPRESKSKKPHTPSWLPVMPNSSHLDAVPQATP 524
V+D+ +G D K +++ +E+ TP+E+++ + TP LP + +S +P TP
Sbjct: 546 VKDLKAQGTRDS-KPIALKEEIVTPKETETSEKETPPPLPTI--ASPPPPLPTTTP 598
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,509,138
Number of Sequences: 237096
Number of extensions: 2017584
Number of successful extensions: 8860
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 8507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8843
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6522878360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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