Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte21o07
(611 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z32683-10|CAA83625.1| 381|Caenorhabditis elegans Hypothetical p... 102 2e-22
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 30 1.5
U41013-2|AAA82300.1| 557|Caenorhabditis elegans Hypothetical pr... 29 2.6
AL110484-6|CAE46683.1| 1345|Caenorhabditis elegans Hypothetical ... 29 3.5
AL110484-5|CAB60334.3| 1343|Caenorhabditis elegans Hypothetical ... 29 3.5
Z70034-6|CAA93850.1| 301|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z70270-7|CAH04652.1| 175|Caenorhabditis elegans Hypothetical pr... 28 6.0
AL031635-9|CAH04762.1| 1136|Caenorhabditis elegans Hypothetical ... 28 6.0
AL031635-8|CAA21041.2| 1088|Caenorhabditis elegans Hypothetical ... 28 6.0
>Z32683-10|CAA83625.1| 381|Caenorhabditis elegans Hypothetical
protein R07E5.3 protein.
Length = 381
Score = 102 bits (244), Expect = 2e-22
Identities = 58/170 (34%), Positives = 97/170 (57%), Gaps = 6/170 (3%)
Frame = +3
Query: 105 NTTTKMALRTYGDKPISFQIEEGGDFYCVGSEVGNYLRLFRGSLYKKYPGMCRRTLTNEE 284
+++TK +TYG +P SF ++E G+ Y +GSE+G YLRL RG+LYKKYP + R+ T+++
Sbjct: 2 SSSTKTLSQTYGPRPQSFSLDEAGERYYIGSEIGAYLRLHRGTLYKKYPLLWRKVATSDD 61
Query: 285 RKRLIDNGLGPHXXXXXXXXXKASEVEDIIEGNDDKYKAVSVSQELATPR-ESKSK---K 452
+ +L + +A EV+++++G+++KY+A + +TPR E S+ K
Sbjct: 62 KDKLKQIAMSNAFLHTNIMLLRAHEVDELLDGSEEKYRAAGAAP--STPRTEGASRTVAK 119
Query: 453 PHTPSWL--PVMPNSSHLDAVPQATPISRSRVHNKKVRTFPLCFDDTDMT 596
W V S HL++VP + PI+ SR K R +D +M+
Sbjct: 120 TPATGWAGQQVTSGSHHLESVPCSCPIAHSR-GRMKHRELVYSAEDLEMS 168
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 29.9 bits (64), Expect = 1.5
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +3
Query: 405 SVSQELATPRESKSKK--PHTPSWLPVMPNSSHLDAVPQATPISRSRV 542
SV+Q P S S P PS LPV P+SS + + P A S S V
Sbjct: 1613 SVTQAPIPPASSPSAPSIPSIPSTLPVAPSSSSVPSSPSAPSESTSTV 1660
>U41013-2|AAA82300.1| 557|Caenorhabditis elegans Hypothetical
protein T06C10.3 protein.
Length = 557
Score = 29.1 bits (62), Expect = 2.6
Identities = 21/71 (29%), Positives = 31/71 (43%)
Frame = +3
Query: 354 SEVEDIIEGNDDKYKAVSVSQELATPRESKSKKPHTPSWLPVMPNSSHLDAVPQATPISR 533
++VE ++ + + SQEL P E KK S L V + L VP+ S
Sbjct: 76 AKVEGKVKAKVESTQNTDNSQELKAPEEKPKKKKKKKSNLIVSASVEKLSIVPEKEDFS- 134
Query: 534 SRVHNKKVRTF 566
+ KK+R F
Sbjct: 135 --ILEKKLREF 143
>AL110484-6|CAE46683.1| 1345|Caenorhabditis elegans Hypothetical
protein Y38E10A.6b protein.
Length = 1345
Score = 28.7 bits (61), Expect = 3.5
Identities = 18/69 (26%), Positives = 25/69 (36%)
Frame = +3
Query: 348 KASEVEDIIEGNDDKYKAVSVSQELATPRESKSKKPHTPSWLPVMPNSSHLDAVPQATPI 527
KA E+E+I E KA QE+ + K P P + P S Q P
Sbjct: 927 KAQEIEEIEESPKKSEKAPEKPQEIQEIPKKSEKAPEKPQEIEKSPKKSEKRQEIQEIPQ 986
Query: 528 SRSRVHNKK 554
+ K+
Sbjct: 987 KSEKTSEKR 995
>AL110484-5|CAB60334.3| 1343|Caenorhabditis elegans Hypothetical
protein Y38E10A.6a protein.
Length = 1343
Score = 28.7 bits (61), Expect = 3.5
Identities = 18/69 (26%), Positives = 25/69 (36%)
Frame = +3
Query: 348 KASEVEDIIEGNDDKYKAVSVSQELATPRESKSKKPHTPSWLPVMPNSSHLDAVPQATPI 527
KA E+E+I E KA QE+ + K P P + P S Q P
Sbjct: 925 KAQEIEEIEESPKKSEKAPEKPQEIQEIPKKSEKAPEKPQEIEKSPKKSEKRQEIQEIPQ 984
Query: 528 SRSRVHNKK 554
+ K+
Sbjct: 985 KSEKTSEKR 993
>Z70034-6|CAA93850.1| 301|Caenorhabditis elegans Hypothetical
protein C18E9.6 protein.
Length = 301
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +3
Query: 483 PNSSHLDA-VPQATPISRSRVHNKKVRTFPLCFD 581
P S L + +PQ P S +H K FP CF+
Sbjct: 4 PTESELASPIPQTNPGSYEELHRKARDVFPTCFE 37
>Z70270-7|CAH04652.1| 175|Caenorhabditis elegans Hypothetical
protein C53D6.10 protein.
Length = 175
Score = 27.9 bits (59), Expect = 6.0
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +3
Query: 414 QELATPRESKSKKPHTPSW-LPVMPNSSHLDAVPQATPISRSRVHNKK 554
++ A P +S P P +P PN+ A P TP++ NKK
Sbjct: 18 EKAAIPAFPESNAPSQPEINIPQFPNAQGTGAPPPPTPLANPTEDNKK 65
>AL031635-9|CAH04762.1| 1136|Caenorhabditis elegans Hypothetical
protein Y47D3B.5b protein.
Length = 1136
Score = 27.9 bits (59), Expect = 6.0
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +3
Query: 402 VSVSQELATPRESKSKKPHTPSWLPVMPNSSHLDAVPQATPISRSRVH 545
VS+ ++L + KSKK + S P+ PNS H + TP+ ++ VH
Sbjct: 732 VSLCEDLKASK--KSKKSRSISSSPIPPNSLHEEET--QTPLRQNMVH 775
>AL031635-8|CAA21041.2| 1088|Caenorhabditis elegans Hypothetical
protein Y47D3B.5a protein.
Length = 1088
Score = 27.9 bits (59), Expect = 6.0
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +3
Query: 402 VSVSQELATPRESKSKKPHTPSWLPVMPNSSHLDAVPQATPISRSRVH 545
VS+ ++L + KSKK + S P+ PNS H + TP+ ++ VH
Sbjct: 732 VSLCEDLKASK--KSKKSRSISSSPIPPNSLHEEET--QTPLRQNMVH 775
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,574,027
Number of Sequences: 27780
Number of extensions: 308423
Number of successful extensions: 785
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 783
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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